Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01675 ATGTTCCACTCGCCCAACTCTGACTTCTCTTCAGGTTCTTCTTTCAGTTCTCCTGATTCGTTCTCCTGGGATGGGCTTCATTTTGAGAGTGATTCTCTTCCTTTCAATGAAAATGACTCTGAAGAAATGCTTCTCTTCGGTCTCATTTCGCAGAGTAGACCTAATACGCCATGTGAAAATGAAGCTAAGGAAGAAGAGGTGAGTTCGATTGAGAAGGGAAAACCCAGAAAGGAAAAATGTTACAGAGGTGTGAGGAGAAGGCCATGGGGGAAATTTGCTGCGGAGATAAGGGATTCAACAAGGCACGGTATAAGGGTGTGGTTAGGGACATTTGACAGTGCAGAAGCAGCAGCTTTGGCTTATGATCAAGCTGCTTTTTCCATGAGGGGTTCTGCTGCTATTCTCAATTTCCCAGTTGAAAGGGTGAGGGAGTCTCTCAGTGGAATGAACTATCGTTCAGAAGATGGGTGTTCGCCTGTAGTGGCTCTCAAGAGGAAGCACTCCATGACAAAGAAAATCACAAGCAAGAAAAGCAAAGATAAGAGAGATGATAGGATAGAAAATGTGGTGGTGTTTGAAGATTTAGGTGCAGATTACTTAGAACAACTATTGAGTAGTTCATTAGAGAGTCCGAGAACATGGTGA 645 0.4372 MFHSPNSDFSSGSSFSSPDSFSWDGLHFESDSLPFNENDSEEMLLFGLISQSRPNTPCENEAKEEEVSSIEKGKPRKEKCYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVERVRESLSGMNYRSEDGCSPVVALKRKHSMTKKITSKKSKDKRDDRIENVVVFEDLGADYLEQLLSSSLESPRTW* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01675 214 SUPERFAMILY DNA-binding domain 80 140 IPR016177 GO:0003677
Pte3g01675 214 Gene3D AP2/ERF domain 80 140 IPR036955 GO:0003700|GO:0006355
Pte3g01675 214 ProSiteProfiles AP2/ERF domain profile. 80 138 IPR001471 GO:0003700|GO:0006355
Pte3g01675 214 FunFam Ethylene-responsive transcription factor 2 79 140 - -
Pte3g01675 214 Pfam AP2 domain 80 130 IPR001471 GO:0003700|GO:0006355
Pte3g01675 214 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Pte3g01675 214 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Pte3g01675 214 SMART rav1_2 80 144 IPR001471 GO:0003700|GO:0006355
Pte3g01675 214 CDD AP2 81 139 IPR001471 GO:0003700|GO:0006355
Pte3g01675 214 PANTHER DNA-BINDING DOMAIN 56 208 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01675 Pte-Chr3 16115710 16116726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01675 33 215 AP2-EREBP Transcription Factor Family AT3G23240 66.845 1.49e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte3g01675 AP2 3.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01675 K14516 - qsa:O6P43_021430 271.166