Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01674 ATGCATGCAGCTATCAAGAATATTCATACAAACCCAATAACAATAGCCAACATGCGTAGGGCTGGAGGAAGTGGTTCTTCTGGTTCATTATCAAGAAGAGAGAAAGCCACAGAAGAGAAGGAAGGATTATCATCAGGAGATGTCAAATACAGAGGAGTACGTAGACGGCCATGGGGAAAGTATGCTGCCGAAATTCGAGACTCAACGAGGCATGGTGCAAGAGTGTGGCTTGGAACTTTTGACACTGCAGAAGAAGCAGCCCGGGCATATGACAGAGCTGCTTACAACATGAGAGGTTCACTGGCAATTGTTAATTTCCCAGACGAATACCCTTTGACCAGTACTGGTTATTCTACTTCTTATTCTTCACCTTCATCTTCATCTTCGGCTGTGTCGTCATCATCATCATCAACTTCTTCATTGCGTGATATGGAGAGTTCTCGTCCGAAACCGGTGTTTGAAATAGAGTACTTGGATGATAGCTTGCTGGACGAACTTCTTAATGTCGAAGAGTACAAGAGAAAAGGAATGTGA 534 0.4382 MHAAIKNIHTNPITIANMRRAGGSGSSGSLSRREKATEEKEGLSSGDVKYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFDTAEEAARAYDRAAYNMRGSLAIVNFPDEYPLTSTGYSTSYSSPSSSSSAVSSSSSSTSSLRDMESSRPKPVFEIEYLDDSLLDELLNVEEYKRKGM* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01674 177 Pfam AP2 domain 49 99 IPR001471 GO:0003700|GO:0006355
Pte3g01674 177 MobiDBLite consensus disorder prediction 15 45 - -
Pte3g01674 177 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Pte3g01674 177 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Pte3g01674 177 SUPERFAMILY DNA-binding domain 49 109 IPR016177 GO:0003677
Pte3g01674 177 MobiDBLite consensus disorder prediction 116 148 - -
Pte3g01674 177 FunFam Ethylene-responsive transcription factor 2 49 108 - -
Pte3g01674 177 Gene3D AP2/ERF domain 48 108 IPR036955 GO:0003700|GO:0006355
Pte3g01674 177 PANTHER DNA-BINDING DOMAIN 35 168 IPR044808 GO:0003700|GO:0009873
Pte3g01674 177 CDD AP2 49 108 IPR001471 GO:0003700|GO:0006355
Pte3g01674 177 ProSiteProfiles AP2/ERF domain profile. 49 107 IPR001471 GO:0003700|GO:0006355
Pte3g01674 177 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Pte3g01674 177 MobiDBLite consensus disorder prediction 116 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01674 Pte-Chr3 16095441 16095974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01674 49 174 AP2-EREBP Transcription Factor Family AT3G23230 60.317 4.73e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte3g01674 AP2 5.2e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01674 - - cave:132179562 148.288