Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01671 ATGCCGTTCAAAAGGTACGTTGAGATCGGCAGGGTTGCTCTCGTTAATTACGGCAGTGACTATGGGAAGCTCGTTGTCATTGTTGACGTCATCGACCAGAACAGAGCACTTGTAGATGCTCCTGACATGGTGAGGTCTCAAATGAATTTTAAGAGGCTTACTCTTACTGACATTAAGATTGATATAAAGAGAGTCCCTAAGAAGAAAGATTTACTCAAAGCAATGGAGGCTGCGGATGTAAAGAAGAAGTGGGAGAATAGCTCATGGGGCAGGAAACTTATTGTTCAGAAGAGACGGGCCGCTCTCAATGATTTCGATAGGTTCAAACTGATGTTGGCCAAAATCAAGAAAGCTGCTGTTGTAAGACAAGAACTTGCCAAGCTAAAAAAGGAGAATGCTGTTTAA 405 0.4272 MPFKRYVEIGRVALVNYGSDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLTLTDIKIDIKRVPKKKDLLKAMEAADVKKKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKKAAVVRQELAKLKKENAV* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01671 134 Gene3D - 92 127 - -
Pte3g01671 134 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Pte3g01671 134 Gene3D - 1 84 IPR014722 -
Pte3g01671 134 PANTHER 60S RIBOSOMAL PROTEIN L14 1 131 IPR039660 GO:0003723|GO:0003735
Pte3g01671 134 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Pte3g01671 134 FunFam 60S ribosomal protein L14-1 1 84 - -
Pte3g01671 134 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01671 Pte-Chr3 16079254 16081643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01671 1 131 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 86.260 3.09e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01671 K02875 - qsa:O6P43_021401 250.366