Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01659 ATGGTGAGAGCTCCGTGTTGTGAGAAGATGGGGTTGAAGAAAGGTCCATGGGCTACAGAAGAAGATCAAATCTTGATAGCTTATATCAACAAACATGGCCATGGGAATTGGCGTGCACTCCCAAAGCTAGCAGGTCTATTAAGATGTGGGAAGAGCTGCAGGCTGCGTTGGATTAATTACTTGAGACCAGATATCAAAAGAGGAAACTTCACTAGAGAAGAAGAGGACACTATCATCATACTGCATGAAAAAATGGGGAATAGGTGGTCTGCAATTGCAGCACAATTACCAGGAAGAACTGACAACGAAATAAAAAATGTGTGGCATACCCACTTGAAGAAGAGGCTCACACAAAGTGATCAACCTTATTCATCGGACACCAAGAAACATCGCAGAAGAAATATAAGCCAATCTGAATCCATTTCCAGTGTCACCATGCAGTCTGAGCTTACCAACAATAACTATGGTACAAACCAAGAGTTGGAAAGCTCAGCATGCACGACATCAAATTCCAGGGACTCATCATCTTCATCATCCGTTGCTGATTCGTCAAGCAGAAATTCTGAGAGAGAGAATAAGGATAGGGTCAAATTGGAAAACATGGAAGACTCCCCAGAGACAGTTCTGCCTGTGATTGATGATAGCTTTTGGTCTGAGGCATCATTGGATCTCGAGGATTCTTCTGTGCCATCGTCAAGTTTTAGTGCACTCCCAGATAATGAAGTCATGATGTTTCCGTTTGATTCGACCAAATCCATGGGACAGGACAACATTTTTGGTACAAGCAATTATCATAATGGAATGGATTTTTGGTATGATTTGTTTGTAACAGCAGGAGAGCCAGTAGATCTGTTTGAAAAATTCTAG 867 0.4198 MVRAPCCEKMGLKKGPWATEEDQILIAYINKHGHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIIILHEKMGNRWSAIAAQLPGRTDNEIKNVWHTHLKKRLTQSDQPYSSDTKKHRRRNISQSESISSVTMQSELTNNNYGTNQELESSACTTSNSRDSSSSSSVADSSSRNSERENKDRVKLENMEDSPETVLPVIDDSFWSEASLDLEDSSVPSSSFSALPDNEVMMFPFDSTKSMGQDNIFGTSNYHNGMDFWYDLFVTAGEPVDLFEKF* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01659 288 CDD SANT 69 112 IPR001005 -
Pte3g01659 288 MobiDBLite consensus disorder prediction 186 202 - -
Pte3g01659 288 CDD SANT 16 61 IPR001005 -
Pte3g01659 288 SMART sant 66 114 IPR001005 -
Pte3g01659 288 SMART sant 13 63 IPR001005 -
Pte3g01659 288 FunFam MYB-related transcription factor 13 66 - -
Pte3g01659 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte3g01659 288 MobiDBLite consensus disorder prediction 137 185 - -
Pte3g01659 288 Gene3D - 69 141 - -
Pte3g01659 288 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 223 - -
Pte3g01659 288 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pte3g01659 288 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte3g01659 288 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte3g01659 288 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte3g01659 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pte3g01659 288 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Pte3g01659 288 MobiDBLite consensus disorder prediction 115 205 - -
Pte3g01659 288 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01659 Pte-Chr3 15892951 15895003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01659 1 286 MYB Transcription Factor Family AT1G06180 48.110 5.12e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte3g01659 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01659 K09422 - gmx:100807569 298.901