Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01658 ATGGCACCCAGTCACAATGCAGTTTCAAACCTACTTTGTGCAGAAGACAATGGCATTTTCCGTGATGATAATTATAGGGGGTTGGTCGAGGACTTTGAGACTCCATGGCACCATAGATATCATGGAATCCACAATCGACGCCATAGTTTGGATGCAGGAGATGGTTTGCCATTGCACAGCGAAGAGTTTTTGGCTCTTCTGTTGGAAAAAGAATGCCAGCATTTGCCGCAAGCTGATTATGTGAGTAAAATAAGGTGCGGGATTTTTGATGCTGGGGACAGAAAAGAAGCTGTGAATTGGATTGAAAAGGTTGGAGCTCATTTTGGCTTTGGACCTCTGTGTGGATATTTAGCTGTGAACTATCTGGACCGCTTCCTTTCTGCTTATGAATTACCTAAGATAAAGGCATGGACAATGCAGTTAGTAGCTGTGGCATGTCTTTCCCTTGCAGCCAAAGTAGAGGAGACTGAAGTGCCTCTGTCTCTTGATTTACAGTTGAACGAATCGAAGTTTATATTTGAAGCTAGAACAATTCAAAGAATGGAGCTACTGGTCCTAAGCACATTGAAATGGAGAATGCAAGCAATTACTCCCTTCTCTTTTATTGATTATTTCCTATGCAAGATCCATGACGAATCTATTCCACATAAAACATCGATCCTGCATGCATGTCAAGTGATTTTGAGCACAATAAAAGGGATTGACTTCTTGATATTCAAACCTTCGGAAATTGCAGCAGCAGTGGCTATATATGTTGCAGGTGAAACCCGAACTGTAGACAGTGAGAAAGCATTATCTGCTCTCGTTCAACAAGTAGAAAAGGAGAGAGTTTTGGAGTGTATTAAAGCCATTCATAATTTGTTATCAACCAGAAAGGACCCTATAAGTGATGCGGTCTCAATCGTGCCTCAAAGTCCAATTGGAGTTCTGGACGCTGCATGCTTCAGCTGCATAACCGATGATAGAGTGACTGGTTCGGTTGCCAATTCATCACATAGTAGCCCTGATGCTAAGAGGAGAAAGCTAAACCGACCCTGTGGCATGGAATCATTATAG 1056 0.4233 MAPSHNAVSNLLCAEDNGIFRDDNYRGLVEDFETPWHHRYHGIHNRRHSLDAGDGLPLHSEEFLALLLEKECQHLPQADYVSKIRCGIFDAGDRKEAVNWIEKVGAHFGFGPLCGYLAVNYLDRFLSAYELPKIKAWTMQLVAVACLSLAAKVEETEVPLSLDLQLNESKFIFEARTIQRMELLVLSTLKWRMQAITPFSFIDYFLCKIHDESIPHKTSILHACQVILSTIKGIDFLIFKPSEIAAAVAIYVAGETRTVDSEKALSALVQQVEKERVLECIKAIHNLLSTRKDPISDAVSIVPQSPIGVLDAACFSCITDDRVTGSVANSSHSSPDAKRRKLNRPCGMESL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01658 351 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Pte3g01658 351 SUPERFAMILY Cyclin-like 59 193 IPR036915 -
Pte3g01658 351 SMART cyclin_7 204 286 IPR013763 -
Pte3g01658 351 SMART cyclin_7 99 187 IPR013763 -
Pte3g01658 351 SMART Cyclin_C_2 196 318 IPR004367 -
Pte3g01658 351 Gene3D - 66 283 - -
Pte3g01658 351 Pfam Cyclin, N-terminal domain 65 193 IPR006671 -
Pte3g01658 351 SUPERFAMILY Cyclin-like 178 303 IPR036915 -
Pte3g01658 351 MobiDBLite consensus disorder prediction 326 351 - -
Pte3g01658 351 PANTHER CYCLINS 61 292 IPR039361 -
Pte3g01658 351 Gene3D - 77 194 - -
Pte3g01658 351 Pfam Cyclin, C-terminal domain 196 292 IPR004367 -
Pte3g01658 351 MobiDBLite consensus disorder prediction 334 351 - -
Pte3g01658 351 FunFam D6-type cyclin 190 282 - -
Pte3g01658 351 FunFam D2/4-type cyclin 77 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01658 Pte-Chr3 15875048 15877844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01658 61 326 Core Cell Cycle Gene Families AT2G22490 47.312 1.70e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01658 K18810 - qsa:O6P43_015367 496.123