Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01655 ATGGAAGCAGATAAGCAAGAAAGCTCAGAGAATCTCAGTGACGAAAATGATCAACCAGATGATGTCAATGACGACTTTGGCACTAAACGCTCTTATCAATGCACGTTTTGCCGAAGGGGTTTCACAAATGCTCAAGCTTTAGGAGGGCACATGAACATTCATAGGAAAGACAGGGCCAAGGCCAAGCATATCTCAGTTAATTCTGCAATTGCTAACAAAACCTACGAGGACCAATTCTCTACCAGATACCTGGCTGAACACACGAAGTACTACCCAGTCTTTGAAGCTCAGAGGAATTACCACCATACGTATTATCAGCCATCACCGTCAAACCCTAGATGCCCTCCAGTTTCATATTCATTTGAGCATAATGTCCTTGCTGCTACAAGGGCCCACGCACAACCTCTGAGTCAAGAGCTATTGGGTGCAAACCTGAGCCTTGGAATGGGTCATCATCATGCGGATGATCAGAGTCAAATGAGGGTTGGAGTTAAGAGTGACGGAGAAGTGGATCTAGAGCTTCGTCTTGGGTACCATCAGTATTAA 546 0.4524 MEADKQESSENLSDENDQPDDVNDDFGTKRSYQCTFCRRGFTNAQALGGHMNIHRKDRAKAKHISVNSAIANKTYEDQFSTRYLAEHTKYYPVFEAQRNYHHTYYQPSPSNPRCPPVSYSFEHNVLAATRAHAQPLSQELLGANLSLGMGHHHADDQSQMRVGVKSDGEVDLELRLGYHQY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01655 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Pte3g01655 181 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
Pte3g01655 181 PANTHER OS07G0101800 PROTEIN 8 179 - -
Pte3g01655 181 Gene3D Classic Zinc Finger 22 89 - -
Pte3g01655 181 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Pte3g01655 181 SMART c2h2final6 32 54 IPR013087 -
Pte3g01655 181 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01655 Pte-Chr3 15811825 15812370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01655 22 63 C2H2 Transcription Factor Family AT3G09290 66.667 1.24e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte3g01655 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01655 - - tcc:18603159 165.622