Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01654 ATGTTGAGAACATTAGGAATTTGGTTTCTGGTTTTAGCACTTCCGATTTGTGTATGCGCAAATGGTGGTGGATATTCAAGATGTAATTGTGATGATGAAGGTAGCTTATGGACGTTTGAGACCATTGTTGAGGGTCAAAAAGTAAGTGATTTCTTGATTGCTGTGGCTTACTTCTCGATCCCCATCGAGCTACTTTACTTTGTTAGCTGCTCAAACGTCCCGTTCAAATGGGTCCTTTTTGAGTTCATTGCTTTTATCGTTTTATGTGGATTGACTCATCTGCTCAATGGATGGACTTACGGACCACATTCCTTTCAACTTATGATGGCACTTACTGTCTTCAAAATTCTCACTGCATTGGTATCATGTGCTACTGCTATTACCCTCATAACTCTTATACCTTTGCTTCTCAAAGTGAAGGTGAGGGAATTTATGCTCAAGAAGAAAACCTGGGATCTTGGACGGGAGGTTGGCATGATAATGAAAAAGCAGGAAGCTGCTTTGCATGTCAGAATGCTTACACAAGAGATTCGTAGGTCACTCGATAGGCATACGATTTTGTACACTACTTTGGTTGAGTTGTCCAAAACTTTGGGATTGCAGAACTGTGCCGTCTGGATGCCAAATGAGTACAGGACTGAGATGAGCCTAACCCATGAATTAAATGGGAGGAATTATAATCATACCATACCTACCACTGACCCAGATGTCAAAAGAATCAAGGGGAGTGATTCTGTAAATATTCTTAAGCATGATTCACCAATTGCTGCTGCCAGTGCCAGAGAATCTGGTGAGCCAGGACCAGTGGCTGCAATTAGGATGCCGATACTTCGTGTTTGCAATTTTAAGGGGGGAACGCCTGAACTAATTCAAGCATGTTATGCAATATTGATTTTGGTTCTTCCTGGTGGACAACCAAGAACTTGGAGCTCTCAGGAGCTAGAGATAATCAAAGTTGTTGCTGACCAAGTAGCTGTGGCCTTGTCTCATGCTGCCATTCTTGAAGAGTCCCAGCTCATGAGAGAGAAATTGGAGGAACAAAATCGAGCTTTACAACAGGCAAAATTAAATGCTATGATGGCTAGTCAGGCTAGGAACTCATTTCAAAAGGCCATGAGTGACGGAATGAGGAGGCCAATGCACTCGATTATGGGATTGCTTTCAATAATGCAGGATGACAATTTAAATCCTGAACAGAGAGTTATTGTGGATGTAATGTTAAGGACAAGCTCTGTCCTGTCAACCTTGATAAATGATGCCATGGATAGCTCAATGAAAGATGATGGAAGATTTCCTTTGGAGATGAATTCTTTCAGACTACATTCTATCATAAAAGAAGCAGCTTATCTTTCCAAATGCTTGTGTGTTTATAAAGGCTTAGGATTCGCTATTGAGGTCGAAAAATCCTTACCTAATAATGTAATGGGTGATGAAAGAAGGTTTTTTCAGGTGATTTTGCATATGGTTGGGAATCTACTGGAAAGTAACCATGGGGTTGGGACTGTTGTGCTTAAGGTCCTTTTAGATAGAGGAAGTCAGGATAAAAATGAACATAGATGGATTGCCCGCAGACAGGGTTTCCCTGATGGAGAAATTTGTATAAGATTTGAATTGGGAATGGACTCTAAATCTAATAGTGCTTCACTGGATGCGGGATTTTGCGGAGGACAGCTTGGTCACGGGTTCTACGCCTATGACAGGGTGGAAGGAGGTTTGAGCTTCAGCGTCTGCAAAAGAATAGTACAGTTGATGCAAGGGAACATATGGGCAACATACAACTCTGAAGGTTTTCCGCAAAGCATGACTGTGATGCTTAGGTTTCAATCTCCTTCATCTGTAACTATAGCCATTCATGAACTTGGAGAATCATCAGAAAATTCACATTCTAACTCTCTCTTCAGAGGTTTACAAGTTCTATTAGCGGATTATGATGGTATGAATAGGACCGTTACACAAAAGTTACTGGAGAAGCTAGGTTGCCATGTCACTTGTGTTTCTTCTGGAATCGAATGCCTCACTGTCATTAGTGGAGCTGGTTCTAGCATTGAAGTTGTTCTTTTGGACCTTCATATGCCCGAGTTAGATGGCTTCGAAGTTGCCATGAGGATCAGGAAGTTCCGAAGTCGAAGGACGCCTGCAATACTTGCACTCACCTCAAATGCCGATGTAGACGTGTGGGAAAGATGCATGCAAATTGGGATCAATGGAGTGATCAGGAAACCAGTTTTGTTACAAGGGATTGCAAGTGAACTTCGACGAGTCCTAGTCTAG 2271 0.4196 MLRTLGIWFLVLALPICVCANGGGYSRCNCDDEGSLWTFETIVEGQKVSDFLIAVAYFSIPIELLYFVSCSNVPFKWVLFEFIAFIVLCGLTHLLNGWTYGPHSFQLMMALTVFKILTALVSCATAITLITLIPLLLKVKVREFMLKKKTWDLGREVGMIMKKQEAALHVRMLTQEIRRSLDRHTILYTTLVELSKTLGLQNCAVWMPNEYRTEMSLTHELNGRNYNHTIPTTDPDVKRIKGSDSVNILKHDSPIAAASARESGEPGPVAAIRMPILRVCNFKGGTPELIQACYAILILVLPGGQPRTWSSQELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQAKLNAMMASQARNSFQKAMSDGMRRPMHSIMGLLSIMQDDNLNPEQRVIVDVMLRTSSVLSTLINDAMDSSMKDDGRFPLEMNSFRLHSIIKEAAYLSKCLCVYKGLGFAIEVEKSLPNNVMGDERRFFQVILHMVGNLLESNHGVGTVVLKVLLDRGSQDKNEHRWIARRQGFPDGEICIRFELGMDSKSNSASLDAGFCGGQLGHGFYAYDRVEGGLSFSVCKRIVQLMQGNIWATYNSEGFPQSMTVMLRFQSPSSVTIAIHELGESSENSHSNSLFRGLQVLLADYDGMNRTVTQKLLEKLGCHVTCVSSGIECLTVISGAGSSIEVVLLDLHMPELDGFEVAMRIRKFRSRRTPAILALTSNADVDVWERCMQIGINGVIRKPVLLQGIASELRRVLV* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01654 756 PIRSF Ethylen_sen_hybr_HK 1 756 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Pte3g01654 756 CDD HATPase_ETR2_ERS2-EIN4-like 470 605 - -
Pte3g01654 756 Pfam GAF domain 182 328 IPR003018 GO:0005515
Pte3g01654 756 Gene3D - 330 427 - -
Pte3g01654 756 ProSiteProfiles Histidine kinase domain profile. 371 588 IPR005467 -
Pte3g01654 756 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 606 IPR003594 -
Pte3g01654 756 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 429 IPR036097 GO:0000155|GO:0007165
Pte3g01654 756 SMART gaf_1 182 338 IPR003018 GO:0005515
Pte3g01654 756 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 755 - -
Pte3g01654 756 CDD REC_ETR-like 636 751 - -
Pte3g01654 756 FunFam Ethylene receptor 4 331 425 - -
Pte3g01654 756 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Pte3g01654 756 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
Pte3g01654 756 Gene3D - 636 756 - -
Pte3g01654 756 Coils Coil 334 364 - -
Pte3g01654 756 Gene3D - 161 329 IPR029016 -
Pte3g01654 756 ProSiteProfiles Response regulatory domain profile. 637 755 IPR001789 GO:0000160
Pte3g01654 756 Pfam Response regulator receiver domain 638 745 IPR001789 GO:0000160
Pte3g01654 756 SMART REC_2 636 755 IPR001789 GO:0000160
Pte3g01654 756 Gene3D - 428 610 IPR036890 -
Pte3g01654 756 Pfam His Kinase A (phospho-acceptor) domain 365 428 IPR003661 GO:0000155|GO:0007165
Pte3g01654 756 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 418 601 IPR036890 -
Pte3g01654 756 SUPERFAMILY GAF domain-like 185 331 - -
Pte3g01654 756 SUPERFAMILY CheY-like 633 754 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01654 Pte-Chr3 15756689 15761868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01654 25 755 Miscellaneous Gene Families AT3G04580 55.676 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte3g01654 GAF 2e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01654 K14509 - qsa:O6P43_021454 1096.65