Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01652 ATGGACCCGGCAGGCAATTCATCTGTTCTTAACAAGCGCCATACTGAGCTTTCAATCAATGAAAGCAGTGGAAGAGATGATGATGAAGACAGAGATGGAGGTGATGAGCCAAGAGAAGGTGCTGTTGAGATTGGTGCCAGGAGACCAAGAGGCCGGCCTCCTGGATCTAAGAACAAGCCTAAACCACCAATCTTTGTGACAAGGGACAGCCCAAATGCTCTCAGGAGCCATGTCATGGAGGTAGCTGGTGGTGCTGATGTTGCAGAAAGCATAGCCCAGTTTGCTAGAAGGCGTCAACGCGGTGTTTGCGTCCTCAGCGGTAGTGGTTCGGTGGCCAACGTAACCCTCAGACAGCCAGCAGCACCTGGAGCTGTTGTGGCACTTCACGGTAGGTTTGAGATTCTATCTTTAAATGGAGCCTTCTTACCAGGACCAGCCCCACCCGGTTCAACTGGATTGACGGTGTATCTTGCCGGAGGTCAGGGGCAGGTTGTTGGAGGAAGTGTTGTTGGGTCTTTGATAGCAGCAGGGCCAGTCATGGTCATCTCTGCAACTTTTGCTAATGCAACATATGAGAGGTTGCCCTTAGAAGATGATGATGAGGGAGGCAGTTCTGCTCAAGGTGCTGCTGGGAACTCCCCACCTGCAATAGGAAGCAGTGGGGGGCAGTTGCAGTCAGGACTTGCTGATCCTTATTCTATGCCTATCTACAATCTGCCACCGAACCTAATGCCCAACGGAGGGCAGGTGGGGCATGAAGCTCTTGCTTGGGCTCATGGACGACCTCCTTACTAA 795 0.522 MDPAGNSSVLNKRHTELSINESSGRDDDEDRDGGDEPREGAVEIGARRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESIAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLNGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLIAAGPVMVISATFANATYERLPLEDDDEGGSSAQGAAGNSPPAIGSSGGQLQSGLADPYSMPIYNLPPNLMPNGGQVGHEALAWAHGRPPY* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01652 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 260 IPR014476 GO:0003680
Pte3g01652 264 FunFam AT-hook motif nuclear-localized protein 74 201 - -
Pte3g01652 264 MobiDBLite consensus disorder prediction 1 17 - -
Pte3g01652 264 MobiDBLite consensus disorder prediction 195 224 - -
Pte3g01652 264 CDD DUF296 75 158 IPR005175 -
Pte3g01652 264 ProSiteProfiles PPC domain profile profile. 71 209 IPR005175 -
Pte3g01652 264 MobiDBLite consensus disorder prediction 206 224 - -
Pte3g01652 264 Gene3D - 74 203 - -
Pte3g01652 264 MobiDBLite consensus disorder prediction 1 71 - -
Pte3g01652 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 187 IPR005175 -
Pte3g01652 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 199 - -
Pte3g01652 264 PIRSF ESCAROLA 3 264 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01652 Pte-Chr3 15745131 15745925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01652 37 265 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 73.160 5.23e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01652 - - qsa:O6P43_021453 411.764