Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01627 ATGGTATATGAATATTTGGAAGTAAGGTCGCATGTTATGGGATCTATTTGCTGCAAATTTATTATAACCCTTTTGCTTCTCTTTGGCGTGATGCCTTTTGGTTTAGGACGTGGAGGTACAGCAGGAAACAAGTTTAGGATGTCACTGGGTTTGCCCGTGGCAGCTACAGTGAACTGTGCTGATAACACTGGGGCAAAGAACCTGTACATCATCTCCGTGAAGGGAATTAAGGGTCGTTTGAACAGGCTTCCTTCTGCTTGTGTTGGCGACATGGTCATGGCTACTGTTAAGAAAGGGAAGCCTGACCTTAGGAAGAAAGTTTTGCCTGCTGTAATTGTGAGGCAGCGGAAGCCATGGCGCAGAAAGGATGGAGTATATATGTACTTTGAGGATAATGCTGGTGTTATTGTAAACCCTAAGGGAGAAATGAAAGGTTCTGCTATAACTGGTCCAATTGGAAAGGAGTGCGCTGATCTTTGGCCGAGGATTGCAAGTGCAGCAAATGCCATTGTTTGA 516 0.4477 MVYEYLEVRSHVMGSICCKFIITLLLLFGVMPFGLGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01627 171 SUPERFAMILY Ribosomal protein L14 42 171 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pte3g01627 171 Hamap 50S ribosomal protein L14 [rplN]. 50 171 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pte3g01627 171 FunFam 60S ribosomal protein L23 34 171 - -
Pte3g01627 171 ProSitePatterns Ribosomal protein L14 signature. 110 136 IPR019972 -
Pte3g01627 171 Gene3D Ribosomal protein L14 35 171 IPR036853 GO:0003735|GO:0005840|GO:0006412
Pte3g01627 171 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 51 170 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pte3g01627 171 SMART Ribosomal_L14_2 50 171 IPR000218 GO:0003735|GO:0005840|GO:0006412
Pte3g01627 171 Pfam Ribosomal protein L14p/L23e 53 171 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01627 Pte-Chr3 15322272 15325052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01627 36 172 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 98.540 2.49e-96 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01627 K02894 - cpap:110825233 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01627 3 15322272 15325052 Pte3g01627 3 15322272 15325052 RCT