Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01626 ATGTTGCAGGACGCCGTTCAAGCTCAACTGCCACCCCCACCAGCAGCTGAGCAAGTTCCAATTGATGAACTATCAAGCCCTATCAGTGCTCGAATTTTCGAGCTTTATGACTCTGGTCTGTTTCAAGACACCCTTCAGAATTCTGAGGTCACATCCAGCTCAAATGGTTGCTATGAGGACTACTCCACTTATGCTACAAATGTATCCTTAGCTTTAGATACAGAAAAAAAGTTCAATATCAATAGTGATTTGGTGAATACACCAACAACTACTACTACTACTACTAGTACTACAGCTACAAGTACTACTACCACAACGAACAACACAGCAAACAACAGTAGCAATCTTTCCATACTTTTTGACTCTCAAGAAGAACTGGATAATGACATTTCTGCTTCCATGGACTTTTCCTCCTCAACATCATTCTCAGTCCCTCCATTTCTCACAACTCAGCAGGACCAATTCGATTTCTCTTCTATGCGGTCTCAGATTGCATTAGGAGCTGGCTCTAATGAAGATGGGGTGCCTCAATATACTGCTGAAACTGTTTCAGCTCTGATGGGCCCCCCATTGGTGTCTGTTTTTGAAGAGGATTGCTTATCTTCAGTCCCTTCTTATGTACCTTTGAACTCTTCATCAACTTCATGTTCTTTTCTCAGCCCTGCCATGGCAGCGTACATGCCTACTGGACATATTAACACCACATTATCTGCTGACAGCTCTGGGATGTTTAATGGTAACATCATTCTGGGGTCTGAGCTGCAGCCAAAAGATCTGGACTACCAAGGTGAAAATGGTGGAATTTACTGCCCAGATTCAAGGTTATTCAACCCCCCTGATCTCCAGGCACTCACCAGTGAGAGTCAGCAACTTGTGGCTGGTCCTGGGGGTTCTACGTCTTTGACACCAGAGATTTCGACGTTGGAAGACTCAGCATTCAAAGTTGGGAAGCTCTCTGTGGAGCAAAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGGAACCAAAGGAACTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACACTGGCGGATAGTAGACCTCGAGTTAGAGGAAGATTTGCAAAGAATGATGAATACAGCGAGAGTCATAGACAAGCTAGAAGCAATCTTGAAGAAGAAGATGATGATCAAGAAGTAGTTGTGAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTACCCTATACAGTCCTGGATTTGA 1269 0.4303 MLQDAVQAQLPPPPAAEQVPIDELSSPISARIFELYDSGLFQDTLQNSEVTSSSNGCYEDYSTYATNVSLALDTEKKFNINSDLVNTPTTTTTTTSTTATSTTTTTNNTANNSSNLSILFDSQEELDNDISASMDFSSSTSFSVPPFLTTQQDQFDFSSMRSQIALGAGSNEDGVPQYTAETVSALMGPPLVSVFEEDCLSSVPSYVPLNSSSTSCSFLSPAMAAYMPTGHINTTLSADSSGMFNGNIILGSELQPKDLDYQGENGGIYCPDSRLFNPPDLQALTSESQQLVAGPGGSTSLTPEISTLEDSAFKVGKLSVEQRKEKIHRYMKKRNQRNFSKKIKYACRKTLADSRPRVRGRFAKNDEYSESHRQARSNLEEEDDDQEVVVKEEDDMVDSSDIFAHISGVNSFKCNYPIQSWI* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01626 422 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 143 381 IPR045281 GO:0009909
Pte3g01626 422 MobiDBLite consensus disorder prediction 361 380 - -
Pte3g01626 422 Pfam CCT motif 323 365 IPR010402 GO:0005515
Pte3g01626 422 Coils Coil 365 385 - -
Pte3g01626 422 MobiDBLite consensus disorder prediction 1 22 - -
Pte3g01626 422 ProSiteProfiles CCT domain profile. 323 365 IPR010402 GO:0005515
Pte3g01626 422 MobiDBLite consensus disorder prediction 361 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01626 Pte-Chr3 15318035 15321764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01626 318 372 C2C2-CO-like Transcription Factor Family AT5G24930 45.455 2.23e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte3g01626 CCT 7.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01626 - - qsa:O6P43_003157 519.235