Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01614 ATGGGCTCTCTCAGCATCAACATCTTCCCTGACACTGGTGACACTGATGGAGCAGTAGCAGCTGCTACCACTACCTCCGCAAGCAACCATGCCAAAATGTTAATCCCCAAGATTGAACCTAAACTCGAACCTTTCGACGAACCAGCGCTGCTCCAACAAGTGAAGGACCCCAAGACATTGTTTTCCCCTTATTCTTCCGCCAGCATTTTGTCTGACTCCCCACATACTCCTTCCTTGGACCCGAGCGCGACAAAAGCTGAAACCTCGGCCACGCATTCTTCTTCTGAACACGAAATGGTGTACTCGGAGTTCCATAGGATTACTGGGCTTTTTCGTACTGCTTTTGCTAAACGGTTGGGTAAGTTTGGAGACACTGACGATTTCGACCCACACTCGCGAGCAATTGTTCCCGTACCACCTGAGAACCATGTCTCAACAGTGGGTGTGACCAGGAGGAACAAGCATAAGGAACTGGTTAGAGTCACAAATTTTGGGGTTCAAGATCATATATATTTCAGAGGCATTGTTAGACGGACCCGAATGACTTATGATTCTTTAAGGATCATGTTCGCCGTAGATGATGGGAAACTCCGAGGTGGTCTCGGGGTAAAAAAGCGGCTGAGAGCTGATCTGAAAGCTTCAGCATTGATGAGAGAACGTGGGTTGTGGTTGAATCGTGATAAGAGAATAGTGGGTGCGATACCGGGCATCGAAATTGGCGATTTATTCTTTTTTAGGATGGAAATGTCTGTGATTGGATTGCATGGTCAACCTCAAGCTGGTATTGATTATCTGCCTGCAATTTATAGTTCAAGTGGGGAGCCAATTGCGACTAGTGTTATAGTTTCTGGTGGCTATGAGGATGATGTGGATAGTGGTGATGTGATAATCTATACTGGTCATGGAGGGCAGGATAAACTTTCTAGACAATGCTTTCATCAGAAGCTAGAAGGTGGGAATCTTGCGATGGAGCGAAGTATGCATTATGGGATTGAAGTGAGAGTTATTAGAGGGGTTAAATACCAAGGAAGTCAAACTACTAAGGTGTATGTGTATGATGGCTTATATAGGATCGTTGATTGTTGGTTCGATGTGGGCAAGTCTGGTTTTGGAGTTTACAAGTATAAGCTTTGGAGAATTGAAGGGCAACCTCAAATGGGTAGTGAAAGTCTTAGGACAGCTGCTAGTCTTAAGTCTAGACCGTTGGAAGTCAAACCAAAGGGTTACCTTTCTTTGGATATGTCTAACAAAAAGGAAAATGTTCCTGTAAGGGTTTTTAATGATATAGATTCTAACCAGGAGCCTTTGAATTATAATTATGTTTGCCGGACTGCCTTCCCACCATTTGCATTTCATCAAAGTGGGGGTGGAAGTGGATGTAGTTGTCTTTCAGATTGTGGCGATGATTGCTTTTGTGCCTCGAAAAATGGAGGTGAGTTCCCTTATAATCGCAATGGATTCCTCGTGAGAGGGAAACCTGTCGTTTTCGAATGTGGTCCTTACTGTAGTTGTCCTCCACATTGTCGGAACCGGGTTACACAAAAGGGGCTTAAAAATAGGTTGGAAGTGTTTAGATCTAGTGAAACAAGTTGGGGAGTTAGGTCCTTGGAGCTGATACATGCTGGTGATTTTATTTGTGAATATACAGGGGTTGTTTTGACAAGGGAGCAAGCGCAGATTTTATCAATGAATGGTGACAAGTTGATTTATCCAAATCGTTTTTCTGATAGATGGACTGAATGGGGTGATCTATCTCAGATATTTTCAGATTATGTCCGTCCTTCTTATCCATCAATTCCTCCGCTGGATTTTGCCATGGATGTTTCTAAAATGAGGAATGTAGCATGTTACATGAGCCATAGTTTAACTCCTAATGTGTTTGTTCAGCTTGTTCTGTATGATCATAACAATTTAATGTTCCCTCATCTCATGCTGTTTGCATTTGAAACTATTCCTCCTTTGAGGGAGCTTAGTCTTGATTATGGAGTGGCGGATGAAGTTACGGGAAAGTTGGCAATTTGCTACTGA 2028 0.4324 MGSLSINIFPDTGDTDGAVAAATTTSASNHAKMLIPKIEPKLEPFDEPALLQQVKDPKTLFSPYSSASILSDSPHTPSLDPSATKAETSATHSSSEHEMVYSEFHRITGLFRTAFAKRLGKFGDTDDFDPHSRAIVPVPPENHVSTVGVTRRNKHKELVRVTNFGVQDHIYFRGIVRRTRMTYDSLRIMFAVDDGKLRGGLGVKKRLRADLKASALMRERGLWLNRDKRIVGAIPGIEIGDLFFFRMEMSVIGLHGQPQAGIDYLPAIYSSSGEPIATSVIVSGGYEDDVDSGDVIIYTGHGGQDKLSRQCFHQKLEGGNLAMERSMHYGIEVRVIRGVKYQGSQTTKVYVYDGLYRIVDCWFDVGKSGFGVYKYKLWRIEGQPQMGSESLRTAASLKSRPLEVKPKGYLSLDMSNKKENVPVRVFNDIDSNQEPLNYNYVCRTAFPPFAFHQSGGGSGCSCLSDCGDDCFCASKNGGEFPYNRNGFLVRGKPVVFECGPYCSCPPHCRNRVTQKGLKNRLEVFRSSETSWGVRSLELIHAGDFICEYTGVVLTREQAQILSMNGDKLIYPNRFSDRWTEWGDLSQIFSDYVRPSYPSIPPLDFAMDVSKMRNVACYMSHSLTPNVFVQLVLYDHNNLMFPHLMLFAFETIPPLRELSLDYGVADEVTGKLAICY* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01614 675 ProSiteProfiles SET domain profile. 519 662 IPR001214 GO:0005515
Pte3g01614 675 SUPERFAMILY SET domain 403 663 IPR046341 -
Pte3g01614 675 SUPERFAMILY PUA domain-like 213 388 IPR015947 -
Pte3g01614 675 Gene3D SET domain 388 675 IPR046341 -
Pte3g01614 675 ProSiteProfiles YDG domain profile. 232 379 IPR003105 -
Pte3g01614 675 ProSiteProfiles Pre-SET domain profile. 458 516 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte3g01614 675 Pfam SET domain 531 662 IPR001214 GO:0005515
Pte3g01614 675 Pfam SAD/SRA domain 231 383 IPR003105 -
Pte3g01614 675 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 136 663 - -
Pte3g01614 675 SMART preset_2 411 503 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte3g01614 675 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 90 674 IPR025794 GO:0016571
Pte3g01614 675 SMART G9a_1 227 383 IPR003105 -
Pte3g01614 675 MobiDBLite consensus disorder prediction 65 97 - -
Pte3g01614 675 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 214 396 - -
Pte3g01614 675 Pfam Pre-SET motif 414 511 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte3g01614 675 SMART set_7 519 668 IPR001214 GO:0005515
Pte3g01614 675 Gene3D - 229 387 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01614 Pte-Chr3 15133961 15138607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01614 173 664 Su(var)3-9 homologs AT5G04940 39.839 1.56e-108 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte3g01614 SAD_SRA 2.9e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01614 K11420 - qsa:O6P43_003131 935.25