Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01594 ATGGAGAACATGGAGTTAGAATCGGTTGCCGACGTTCCTGATACTCCAGATAGACCAATGTCTAGGCGTTATAGTAATGGGCGATGTGTGGATAACATGGATGAAGAACATGTGAATGAGCTGGATTGGAGGAATTTTTATGTGGCTGAAAATGGCAACAGCAGAAGACTGGAAAATTATCCTCAAGGAATTTGCTGCAGAAATGAAGTCGAGATTGGTTCCAATGCTATTGGAAATTGCCCATTGAAGAAACTGCACGCCCCTCATGGTGTTTCCTTATTCAGGAAAGCATCAATTGAGAACGTGAATGAGTCTAGATCCCCTCAGGTGGCTGAAAAGAAGGGCAAATGCAAAGAAATTTGCAGTAATTCTGCTCCGAAATTGTCTGGGGCACGAAAGATTTCTTTATTCGACTTGACAGAAGAGAAGGGACAATCTCTGAAAATGAGACCAACTATCCTATTTCATAGGGCGGAAGATATTTCAACTGTTGAAAGTACAAGAAAGAAATTGAGCAACAGATGCAACTTTGCTCATATCAACTTTAGTGCCTCGGCAAGCTCTAGCTGTGCCACAACTACAAAGGACATGGCAGTTTCGAAACATTGTGAGTTTCCTAATCTGGCAATGAGTTGTGGAGAAATGCTTGACCTCTCAAGTGGTTCCCCTCTAAACGCTGATGTTCGGAATCCTCCACACTGTCATCTGTTTGGTAATCAACGGTCCAGCAGCCCGAAAAGGTTGGTTGAGAATGGATGCATATCACCAAACGGTATTGCAACTACGGGTAAACAATCAGCGGATAATTTCCATAATACTGAAGAAGTTGGCGGTTCTGCAGTTTCAGGCAACATACCTCTTGAAGATATGCGCGATATAGTTGCTGATGAGAAGTGTTGTGATGAAGTGAACGGAAAAGGGTTACTAATACATTCATCCACATCGAGTGGGAAAAATGCAGGATCTGGCCTTGTCTGGAATTCTTTGGAATGCTTTGGAGAACAAGGTGATTGGAAAACAACTTCTCGACATTTGAGGAATCCCAATCAGTTCAAGCAAGATGGGATGGGGCATCCTTCTAGAATGAACAATGATGTTGGCAGCTTAAGTGATGTGCAGGAACAGAGTGGAGTGGATGAAAATGTGAGCGACAGCAGACAAAACAACGAGGTGGTGTGCATTCTAGGTGATGCTGCACTATCAACTTCGGAGGCTGTTTCTAGGACAGGTGGAATAACTGAATCTAAAGTTGTAAGAAATGCAGTAAATAAAAGGAAAAGGAAAGAGGGAACAACTTCAAGAAATCTGGTGGATGGTTATTCATCAGTTTCACGGGACTCTGATGTCATATTTCTGGGTTCATCTGGAGAACCAACAAATCCAACAACATCCGAAATTCAGCAACTTTTAGGGAATCGGAATGCTGAAGTAGCTCCTCTGTCACATGAACATAGTGAAACAATTTATCTAGAATTGGATGGTGTGCATAATGAGGGGTTAGATGCAAGATCGAGACAGCTTGAGGCTGATGAGAAATTGGCCCTTGAGCTCCAACAACAATTATATTATGAGGAATCTGCCCTTGAAGGTGGAGGGATGGATGAGTATTTGGCATGGAACCTGCATCAAGAGGAGGAAGCGCTTCACAACATTGGTCCCTCTATGCTACATCGCCAACGGATGCCAGGTCAGTCAAATAGACAGCCCCAGCTGCGATATAATCAAAGGCCTTTGGATAGGAGAAGAGCCCGTTCTCAGGTTTTTGTTCCTAATAGAGTGGCACCATCAAGTAGTCGTATTGTCATCCAGCCACCTCCAACGGTATTAGACCCGACGAGATTCAGATTTTCCCCAGATACGGACTTAGACATGCACCTTGATTTTTTAGAAGCATTGGAAGCTGCATCAGGAGAATTTGGTGATATGGGAATGGCTGATGATGTCTTATATGTTCAGCGTGATTTTAACGAAAATGATTATGAAATGTTATTGGCCCTTGACGAGCATAATCATCAACATGCTGGTGCAACTGCTAATCAAATTAGTAGTTTGCCGCAATCCATAGTACAGAGTACTTCCATTGAAGAGGCATGCGCAGTTTGTCTTGAAACACCAACAATCGGAGATACGATTCGCCATCTTCCTTGTTTACACAAATTCCACAAAGAATGTATTGATCCATGGCTTCGTAGGAAAACATCATGCCCAGTTTGCAAGTCATCAATTGCCTAA 2232 0.4292 MENMELESVADVPDTPDRPMSRRYSNGRCVDNMDEEHVNELDWRNFYVAENGNSRRLENYPQGICCRNEVEIGSNAIGNCPLKKLHAPHGVSLFRKASIENVNESRSPQVAEKKGKCKEICSNSAPKLSGARKISLFDLTEEKGQSLKMRPTILFHRAEDISTVESTRKKLSNRCNFAHINFSASASSSCATTTKDMAVSKHCEFPNLAMSCGEMLDLSSGSPLNADVRNPPHCHLFGNQRSSSPKRLVENGCISPNGIATTGKQSADNFHNTEEVGGSAVSGNIPLEDMRDIVADEKCCDEVNGKGLLIHSSTSSGKNAGSGLVWNSLECFGEQGDWKTTSRHLRNPNQFKQDGMGHPSRMNNDVGSLSDVQEQSGVDENVSDSRQNNEVVCILGDAALSTSEAVSRTGGITESKVVRNAVNKRKRKEGTTSRNLVDGYSSVSRDSDVIFLGSSGEPTNPTTSEIQQLLGNRNAEVAPLSHEHSETIYLELDGVHNEGLDARSRQLEADEKLALELQQQLYYEESALEGGGMDEYLAWNLHQEEEALHNIGPSMLHRQRMPGQSNRQPQLRYNQRPLDRRRARSQVFVPNRVAPSSSRIVIQPPPTVLDPTRFRFSPDTDLDMHLDFLEALEAASGEFGDMGMADDVLYVQRDFNENDYEMLLALDEHNHQHAGATANQISSLPQSIVQSTSIEEACAVCLETPTIGDTIRHLPCLHKFHKECIDPWLRRKTSCPVCKSSIA* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01594 743 MobiDBLite consensus disorder prediction 1 26 - -
Pte3g01594 743 CDD RING-H2_PA-TM-RING 698 739 - -
Pte3g01594 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 664 743 IPR013083 -
Pte3g01594 743 PANTHER SI:CH211-59O9.10 419 742 - -
Pte3g01594 743 MobiDBLite consensus disorder prediction 340 368 - -
Pte3g01594 743 FunFam RING/U-box superfamily protein 663 743 - -
Pte3g01594 743 SMART ring_2 698 738 IPR001841 -
Pte3g01594 743 MobiDBLite consensus disorder prediction 342 368 - -
Pte3g01594 743 Pfam Ring finger domain 697 739 IPR001841 -
Pte3g01594 743 SUPERFAMILY RING/U-box 697 742 - -
Pte3g01594 743 ProSiteProfiles Zinc finger RING-type profile. 698 739 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01594 Pte-Chr3 14834655 14839368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01594 1 744 C3H Transcription Factor Family AT1G04790 30.649 5.81e-65 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01594 - - qsa:O6P43_003049 465.307