Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01532 ATGCCGACCATGGGGTCATCTCTAAGTTGCTGCGATTCAGAGAGAATAGATGAAGGGACACCAACCATTGGTGGGGCTAATCCATCTTGGAGGATATTCACATACAAGGAACTGCATACAGCTACAAACGGTTTCCATGAAGATAATAAACTTGGTGAAGGTGGGTTTGGAAGTGTGTATTGGGGAAAAACTACAGATGGCCTTCAGATAGCTGTGAAGAAATTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCTGTTGAAGTTGAGGTCCTTGGAAGGGTTAGGCACAAAAACCTTCTAGGTCTAAGGGGATATTGTGCAGGGACAGATCAGAGACTTATAGTCTATGATTACATGCCAAATCTCAGCTTGCTTTCTCATCTCCATGGTCAATTTGCTTGTGAAGTTCGACTGGATTGGAGAAAGAGAGTAAAGATTGCACTTGGTTCTGCTGAAGGCTTAAGGTATTTGCACCACGAAGTAACACCCCACATCATTCATAGAGACATCAAGGCCAGCAACGTACTCCTGGATGAAGATTTTGAACCTCTAGTTGCTGATTTTGGATTTGCAAAGCTAATCCCGGAAGGAGTTAGCCACATGACTACACGAGTGAAGGGTACATTGGGTTACTTGGCGCCTGAATATGCTATGTGGGGGAAGGTCTCAGAAAGTTGTGATGTCTATAGCTTTGGAATTCTTCTGTTAGAACTCATCACAGGCAGGAAACCAATTGAAAAGCTTCCTGGTGGTATCAAGAGAACCATAACTGAATGGGCTGAACCATTGATAAGCTATGGAAAATTCAAGGAGCTTGTGGACCCTAAGCTACGTGGAAATTTTGATGAAAACCAATTCAAGCAGTTCATTAATGTGGCTGCTCTATGTGTGCAGAGTGACCCTGATAAGCGCCCTAACATGCAGGAAGTTGTCAGACTTCTGAAAGGCTATGATATTCAAGATAAAGTGAAGCAAATGAGAATTGACAGTGTCAAGTATGATCAGAAGTTAATGGAGCTTGATCAAACTTCTGATGATGAAGATGAAGGTGGAGGTATTCATGGGAAGGATAATGGTTATGGTGTTTTCAGTGCCATTGATGTGCAGAAGATGGAAGATACTTACAAGAAAGTTGCAGACCAGAAATTGACCAGACATGTTTGA 1170 0.4239 MPTMGSSLSCCDSERIDEGTPTIGGANPSWRIFTYKELHTATNGFHEDNKLGEGGFGSVYWGKTTDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQFACEVRLDWRKRVKIALGSAEGLRYLHHEVTPHIIHRDIKASNVLLDEDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELITGRKPIEKLPGGIKRTITEWAEPLISYGKFKELVDPKLRGNFDENQFKQFINVAALCVQSDPDKRPNMQEVVRLLKGYDIQDKVKQMRIDSVKYDQKLMELDQTSDDEDEGGGIHGKDNGYGVFSAIDVQKMEDTYKKVADQKLTRHV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01532 389 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Pte3g01532 389 Pfam Protein kinase domain 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01532 389 CDD STKc_IRAK 51 318 - -
Pte3g01532 389 ProSiteProfiles Protein kinase domain profile. 45 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01532 389 Gene3D Phosphorylase Kinase; domain 1 22 120 - -
Pte3g01532 389 SUPERFAMILY Protein kinase-like (PK-like) 27 325 IPR011009 -
Pte3g01532 389 PANTHER OS01G0253100 PROTEIN 26 320 - -
Pte3g01532 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pte3g01532 389 SMART serkin_6 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01532 389 Gene3D Transferase(Phosphotransferase) domain 1 121 335 - -
Pte3g01532 389 FunFam PTI1-like tyrosine-protein kinase At3g15890 121 333 - -
Pte3g01532 389 FunFam PTI1-like tyrosine-protein kinase At3g15890 19 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01532 Pte-Chr3 13780305 13782645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01532 33 353 Trihelix Transcription Factor Family AT1G70460 47.164 3.44e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pte3g01532 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01532 - - pop:18100538 636.721