Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01529 ATGGCTCAGGAGGCAAACCCAAAAGGCAGGCTGACTGTTGAAGAAGTAATGGAACGCGGAGTGTTGGAAAACCCATCGTACATGGGCAGCGGATGCGGTTACATTAGATTTGTTGATCCTCCTATCCACGAATGGCCATATTACTCGGTTGAATTCATGCATGACCGTATCGAGCAACTTGTGCTCGAGAACACAGTTGCTCACGAGAAGCGGGAAAGAGCTAACAAAGAATTGATAGATTTAGGTGCACCAGCAATAAAATTAAGGCCAGGATCAAAGGTTGCCCTTGTAGGACCAAGTGATGGTGGAAAAACGACAATAGCAAATTTGATTGAGAGATTCTATGACCCGATGAAGGGAAAAATCTTGATAAATGGGGTTTCTTTGAATGATATATCACATTGTCATCTACACAAAAAGATCAGTATAGTGAGCCAGGAGCCTGTTCTTTTCAATTGCTCTATTGAGGAAAACATTGCCTATGATATCGGTGGCAAAATTGACATTGCCAACATAGAAAATGCTGCTATAATGGTAAATGCACACGAGTTCATATCAAAATTTCCAGATAAATATCAAACTCATGTAGGAGAACGTGGCATAAGTTTCTCTGGAGGTCAGAAACAGAGGATAGCAATTGCCAGAGCCCTGCTTATGGATCCTAAAATTCTGCTGCTGGATGAAGCCACCAGTGCTCTTGATGCTGAAAGTGAATACCTAGTACAGGATGCCATGAACTCTTTGATGAAGGGACGGACAGTTCTGGTTATAGCTCATAGGTTATCAACTGTCAAGAGTGCAGATGTTGTAGCTGTTGTTTCTGAAGGCCAGATAGTTGAAAGTGGCACGCATGATGAACTCCTCGAACAGAAAGGTGTTTATACTGCATTGGGTTTAGAGTTTAGAGTTTAG 912 0.4221 MAQEANPKGRLTVEEVMERGVLENPSYMGSGCGYIRFVDPPIHEWPYYSVEFMHDRIEQLVLENTVAHEKRERANKELIDLGAPAIKLRPGSKVALVGPSDGGKTTIANLIERFYDPMKGKILINGVSLNDISHCHLHKKISIVSQEPVLFNCSIEENIAYDIGGKIDIANIENAAIMVNAHEFISKFPDKYQTHVGERGISFSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMNSLMKGRTVLVIAHRLSTVKSADVVAVVSEGQIVESGTHDELLEQKGVYTALGLEFRV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01529 303 Gene3D - 86 297 IPR027417 -
Pte3g01529 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 297 IPR027417 -
Pte3g01529 303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 300 IPR003439 GO:0005524
Pte3g01529 303 Coils Coil 57 77 - -
Pte3g01529 303 Pfam ABC transporter 86 231 IPR003439 GO:0005524
Pte3g01529 303 SMART AAA_5 90 283 IPR003593 GO:0016887
Pte3g01529 303 FunFam ABC transporter B family member 25 64 300 - -
Pte3g01529 303 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524|GO:0016887
Pte3g01529 303 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 86 297 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01529 Pte-Chr3 13666217 13682684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01529 91 297 Calmodulin-binding Proteins AT2G36910 55.924 9.69e-68 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01529 - - minc:123204523 352.443