Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01526 ATGGACGAGATTTTTCCTAAACTAAGTACTCCTCATCCTGCTGCTGCTCCCTCAGAGCAATCCTATGTTGTTTCTCAGCTCTCTCAACCTTCATCACCTAATCTACAAGTACAATCAGAAAGCAGTGGCTTAAATTTGAACGAAAAGGTGAGTCCAAGTATACTACTCATCATTATCATCCTTGCTATAATTTTCTTCCTTTCTGGTTTGCTTCATCTCCTAGTGAGATTGCTTTGGAGACCACAGACTAGAGACCCTGATGATATAGAGAGTGTGACTGCTCTTCAAGGCCAACTGCAGCAACTGTTTCATCTACACGATGCTGGGGTAGACCAGTCATTCATCGACACCCTTCCTCTGTTTCAATACCAAACCATCATAGGCTTGAAGAACCCTTTTGACTGTGCAGTTTGCTTGTGTGAATTTGAGCCCGATGACAAGCTCAGACTGCTCCCAAAATGTAGTCATGCTTTTCACATGGAATGTATTGACACTTGGCTCTTGTCCCATTCAAATTGCCCTCTCTGTAGAGCTAGTTTACTCCCTGACTTCTCACAGAACAATAGCTGTTCCCCCATTGTACTTGTTCTCGAATCTGGGAGTGAGAGTTCCAGAGAGATTGTTCCAGATGGAGAAGCTGTTCTGGTAAGAACCAGCTCTATGTTGACAGCTAATTCCCATCTGGGGTGTAATGGAGAACATGATTTTGGATCAAGCCGAATGGATTTGTCACATAAATCTAATGACTTTGAAGTTCGACTTACAGAGAACCACAGTTCCACTCTAACATCAACTGCGGATTCAAAGGAGAAGGTGGTGACTGTTAAGCTGGGGAAGTACAGAAATGTAGGTGGTGGTGAAAGTGGTACTAAAAACAATGCTGATTCAAGAAGGTGTTTTTCTATGGGGTCTTTTGAGTATGTTATGGACGAGAACTCTCGTTTGCTGGTACCTATCAGAACCCCCATGAAAAAGCAGTCTAGCAAGAAGCCTGTTTTGCCATTAGCACCAGGCCATAGACTAGCAATGTCTGAATGTGACTGTGAATCAAGAAGAGAATTCAAATTTCAAAGCTTCGATACAGCTAAGAAAATTGGCATGTCTGTGCCTGCTGCAGGTATTGTGGATAACAATAGTGATGGTGGTGGTGCAGTTACATGCAACAGGAAAGAGAGCTTTTCCATATCAAAGATATGGCTGAGGGAGAAGGACAAATCCAATTCAGAAGCTCATTCTTCCAGAAGAGCTTTTTCATTTAGATTCCCAGTGCAGCAGCCAAATGCCATGGCTAACAATAAGCAGCACGTAGCAGATATGAAACGAAAGAGTGAGTCTAAGATTGATTCTACCAGGTGGGAAAATGGAGGAAGTGAATTCAGTTATGATGAGGAAATCCGAAGTTACATGAGTATGGATTCTCAGCCAAGAGCACCTTCTTTTGCAAGAAGGACTCTGCTATGGCTCATGGGAAGACATAACAGGATTGTTAATCCATCCTCTGATATTATCTTTTAG 1515 0.4257 MDEIFPKLSTPHPAAAPSEQSYVVSQLSQPSSPNLQVQSESSGLNLNEKVSPSILLIIIILAIIFFLSGLLHLLVRLLWRPQTRDPDDIESVTALQGQLQQLFHLHDAGVDQSFIDTLPLFQYQTIIGLKNPFDCAVCLCEFEPDDKLRLLPKCSHAFHMECIDTWLLSHSNCPLCRASLLPDFSQNNSCSPIVLVLESGSESSREIVPDGEAVLVRTSSMLTANSHLGCNGEHDFGSSRMDLSHKSNDFEVRLTENHSSTLTSTADSKEKVVTVKLGKYRNVGGGESGTKNNADSRRCFSMGSFEYVMDENSRLLVPIRTPMKKQSSKKPVLPLAPGHRLAMSECDCESRREFKFQSFDTAKKIGMSVPAAGIVDNNSDGGGAVTCNRKESFSISKIWLREKDKSNSEAHSSRRAFSFRFPVQQPNAMANNKQHVADMKRKSESKIDSTRWENGGSEFSYDEEIRSYMSMDSQPRAPSFARRTLLWLMGRHNRIVNPSSDIIF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01526 504 CDD RING-H2_EL5-like 134 177 - -
Pte3g01526 504 MobiDBLite consensus disorder prediction 1 21 - -
Pte3g01526 504 MobiDBLite consensus disorder prediction 435 451 - -
Pte3g01526 504 FunFam RING-H2 finger protein ATL46 97 182 - -
Pte3g01526 504 Pfam Ring finger domain 134 177 IPR001841 -
Pte3g01526 504 SMART ring_2 135 176 IPR001841 -
Pte3g01526 504 SUPERFAMILY RING/U-box 115 186 - -
Pte3g01526 504 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Pte3g01526 504 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 47 399 - -
Pte3g01526 504 MobiDBLite consensus disorder prediction 432 452 - -
Pte3g01526 504 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 182 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01526 Pte-Chr3 13598856 13600814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01526 38 500 C3H Transcription Factor Family AT2G18650 44.215 1.06e-94 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01526 - - qsa:O6P43_022263 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01526 3 13598856 13600814 Pte3g01526 3 13598856 13600814 RCT