Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01503 ATGAAAATGGTGGATCCAAGTGACAAAGGATCAGAATATGAAGAAGTAAGCAGCAGAAGCCCGAACGGGGTTAGCTCCGGAGACGGCCATATGAATGAGCAGAAGAAAACTTGTGCTGATTGCGGCACCACCAAGACGCCTCTTTGGAGAGGTGGTCCAGCTGGCCCCAAGTCATTATGTAACGCTTGTGGGATCAGAAGCAGGAAGAAGAGAAGAGCTGTACTTGGAGTGAACAAAGGAAGCTCAGATGATCATAGTAGCAATAGTAGTTGTAGTAATAAAAAAGCAAAGAAAAGTAATAGTGGGTGTGGGAACAATCACAAGTTTGGCGATGGATTGCAGCAGAGATTGATGGCTTTGGGTCAAGAGGTATTGATGCAGAGATCAACAGTTGAGAGACAGAGGAAGAAGTTGAAAGAAGAAGAACAAGCAGCCGTTTTGTTGATGGCTTTATCTTATGGATCAGTTTATGCTTAG 477 0.4423 MKMVDPSDKGSEYEEVSSRSPNGVSSGDGHMNEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAVLGVNKGSSDDHSSNSSCSNKKAKKSNSGCGNNHKFGDGLQQRLMALGQEVLMQRSTVERQRKKLKEEEQAAVLLMALSYGSVYA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01503 158 PANTHER OS01G0976800 PROTEIN 9 158 - -
Pte3g01503 158 MobiDBLite consensus disorder prediction 1 15 - -
Pte3g01503 158 ProSiteProfiles GATA-type zinc finger domain profile. 32 68 IPR000679 GO:0006355|GO:0043565
Pte3g01503 158 MobiDBLite consensus disorder prediction 80 108 - -
Pte3g01503 158 CDD ZnF_GATA 37 72 IPR000679 GO:0006355|GO:0043565
Pte3g01503 158 MobiDBLite consensus disorder prediction 16 41 - -
Pte3g01503 158 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 34 72 - -
Pte3g01503 158 SMART GATA_3 32 98 IPR000679 GO:0006355|GO:0043565
Pte3g01503 158 MobiDBLite consensus disorder prediction 1 108 - -
Pte3g01503 158 Gene3D - 30 74 IPR013088 GO:0006355|GO:0008270
Pte3g01503 158 Pfam GATA zinc finger 38 72 IPR000679 GO:0006355|GO:0043565
Pte3g01503 158 ProSitePatterns GATA-type zinc finger domain. 38 63 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01503 Pte-Chr3 13363910 13365247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01503 3 159 C2C2-Gata Transcription Factor Family AT5G49300 57.862 7.39e-53 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte3g01503 GATA 4.6e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01503 - - zju:107433211 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01503 3 13363910 13365247 Pte3g01503 3 13363910 13365247 RCT