Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01502 ATGGCCTTGGATTTCTTCTACCATCACCATCGGCCGAGTGGTTGTTTCTTGTTCTTAAAACTATTGTGGTTTGCTTTGTGCTATCTACCTTTGTCAATCTCTCAGCAGCCAGCAGCAGAAGCCCCAGCATCAGCAGCGCAACCATCTGGTTCATGTAATGGTATATTCGTATCCTACGCCTACACAGGTGGCGTGAAGTTGCCACCCAATGTGTCGGATCCCAGCCAACAGCCGTACAGATTTGAGTCCACGCTTGCTGTGCTTAACCATGACCTCAATGCGCTTAAATCGTGGAAAGTTTTTGTGGGTTTTCAACATAAGGAGATTTTGGTGTCTGCTTCAAGTGCTGTGCTTGCTGATGGGTCTAGCTTGCCTGGTAGCGTTGAGAATGGTACGGTCTTTACTGGGTTCCCTATGTCTGATCTGAAGTCGGCTATAGAGACTGCTGGTGATCAGACCCAGATGCAGGTTCAGGTCGACTTGGTTGGCACACAGTTCGGTGTTGCATCTCCTAAAATTCCAATGCCTTCTAATATCTCACTGGCTAATGATGGCTGGCTTTGCCCCAGACCCACTATGTCAACTGGGAACAGGGAGATGCATGTGTGTTGCCTGAAAGATGAGAAGTTCATATCAAACATCACTCTAGATGACAAATTCCTGCCTCGCCAAAATGGTGATCTGATTATTATGTATGATGTGACCAGCACTTATGGATCTAATTATTTTGCACAGGTGACAATTGAAAATCATAACCCTCTTGGCCGTCTTGATAATTGGCAATTAAGCTGGGACTGGATGAGAGATGAGTTTATATACACAATGAAGGGGGCATCAACTTCAGTCAAGGATTCTACTGATTGTATATTTGGCCCGCAAGCTACATACTTTCAGCAGATGGACTTCACTCAAGTACTGAACTGTTATAGAAGACCAACCATAGTTGATCTGCCTCCTACCCAAGCCAATGACACAACATTTGGTAAAATTCCTTCCTGCTGTCGTAATGGTACTATCTTGCCACCAACAATGGATCCTAGCAAGTCAATTTCAAGTTTCCAGATGCAAGTCTACAAAATGCCACCAGATCAGAATCGTTCCATGCTTACACCTCCTCAGAATTGGAGGATAAACGGTACTCTGAACCCTGATTACAAATGCGGCCCTCCTGTGCGAGTTAGTCCTAGTCAATTCCCAGATCCCACTGGCTTTCCTGTCAATGCTACTGCCATTGCTAGCTGGCAAGTTGTGTGCAATATAACGCAGTCCAAGAGTGCAGCTTCAAAATGCTGTGTCTCGTTTTCAGCATACTATAATGATTCTGTTATACCATGCAATACTTGTGCATGTGGTTGCCCCAAAAATAAGGCTCGAACTTGTAGTACCTCTGCACCAGCAATGCTTCTTCCTCCAGAAGCACTTCTTGTTCCTTTTGAGAATCGCACTGCCAAGGCTTATGCCTGGGCTGGCTTGAAACATCTAGCAATGCCGAGACCAGTGCCATGTGGTGATAACTGCGGAGTAACTATCAACTGGCACCTGTTGACAGATTACAACCGCGGATGGAGTGCAAGGATCACACTTTTCAATTGGGAAGAAACTAATTTTGCTGATTGGTTTACTGCCATAGAAATGGATAAAGCAGCTATAGGTTTCGAGAAGGCGTATTCATTCAATGGAAGCGCTCTGGAAGTGCAGGGTGTGAACAAAACAATATTCATGGAGGGTCTCCCTGGTCTTAACTACCTTGTGGCAGAAACAGATGGTCCAAATCCCCAACGGGACCCTAGGGTGCCTGGTAAACAACAATCAGTGATCTCATTCACCAAGAAGACCACTCCTGGAATCAACGTAGCTGGTGGAGATGGGTTTCCCTCAAAAGTCTACTTCAATGGGGAGGAATGTTCTCTTCCTTCATTATATCCAACCAGTGGATCAGGAAGACACTCAGCGCTGGCTTTCTCAATTGTCCTATCAGTTCTAGCCTTCATATTCGTGCATTCATAG 2007 0.4544 MALDFFYHHHRPSGCFLFLKLLWFALCYLPLSISQQPAAEAPASAAQPSGSCNGIFVSYAYTGGVKLPPNVSDPSQQPYRFESTLAVLNHDLNALKSWKVFVGFQHKEILVSASSAVLADGSSLPGSVENGTVFTGFPMSDLKSAIETAGDQTQMQVQVDLVGTQFGVASPKIPMPSNISLANDGWLCPRPTMSTGNREMHVCCLKDEKFISNITLDDKFLPRQNGDLIIMYDVTSTYGSNYFAQVTIENHNPLGRLDNWQLSWDWMRDEFIYTMKGASTSVKDSTDCIFGPQATYFQQMDFTQVLNCYRRPTIVDLPPTQANDTTFGKIPSCCRNGTILPPTMDPSKSISSFQMQVYKMPPDQNRSMLTPPQNWRINGTLNPDYKCGPPVRVSPSQFPDPTGFPVNATAIASWQVVCNITQSKSAASKCCVSFSAYYNDSVIPCNTCACGCPKNKARTCSTSAPAMLLPPEALLVPFENRTAKAYAWAGLKHLAMPRPVPCGDNCGVTINWHLLTDYNRGWSARITLFNWEETNFADWFTAIEMDKAAIGFEKAYSFNGSALEVQGVNKTIFMEGLPGLNYLVAETDGPNPQRDPRVPGKQQSVISFTKKTTPGINVAGGDGFPSKVYFNGEECSLPSLYPTSGSGRHSALAFSIVLSVLAFIFVHS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01502 668 Pfam COBRA-like protein 242 421 IPR006918 GO:0010215|GO:0016020
Pte3g01502 668 SUPERFAMILY Carbohydrate-binding domain 224 286 IPR008965 GO:0030246
Pte3g01502 668 PANTHER COBRA-LIKE PROTEIN 7 23 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01502 Pte-Chr3 13347105 13350281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01502 52 653 COBRA Gene Family AT4G16120 68.823 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01502 - - qsa:O6P43_003612 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01502 3 13347105 13350281 Pte3g01502 3 13347105 13350281 RCT