Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01476 ATGGATCCAAAACAAGAGTTCGTGTTCCGCTCCAAACTCCCAGACATCTACGTGCCCAGCCACCTCTCTGTCCATTCCTATTGCTTTGAAAACTTGTCCCTATCCAAACACCGTCCTTGCTTAATCAATGGCAGCACTGGAGAGATCTTCACCTATGGAGAAGTTGACCTCTCAGCTCGCAGAGTTGCCTCTGGCCTCAACAAACTTGGTATCAAACAAGGCCAAGTGATCATGCTGCTCCTCCAAAATTGTCACCAATATGTGTTTGCTTTTCTAGGAGCTTCCTACCTTGGTGCCATTATCACCTCTGCTAATCCTCTCTACACTTCAGCTGAGATTGCCAAACAGGCAAAAGCATCCAACGCCAAATTAATTATAACCCAAGCTGCTTTTGTCGACAAAGTCTACGATTTTGCAAAAGAAAATGGTACCAAGCTCATGTGTGTTGATCACCATGTCCAGTCTTTGTCCATTTTAGGTGGCTTGTTGAGTTTTGATTTGCTTACTCAAGCAGATGAAAATTCCATGCCCATTGTCGAAATCAACCCATATGACATCGTTACACTTCCCTATTCATCTGGGACAACTGGAATGCCTAAAGGGGTGATGCTATCCCATGAATCTATGGTGACCAGTATGTCAAAACTGGTTGATGGAGAAAACCCAAATCTGTATTTTCACAATGAAGATGTCATACTCTGTGCGTTGCCAATGTTTCATATCTATGCCCTTCACTCGGTTTTGCTTTGTGGGATTAGAGCTGGGGCAACTGTTTTGATTATGCAGAAATTTGATATGGTCAAGATGTTTGAGTTGGTTCAGAAATACAAAGTGACCATTGCCCCATTTGTGCCACCCATTCTTTTGGGTATCACCAAGAATCCCGAAGTGCATAACTATGACCTGTCATCCATTAGGATGGTCATCTCTGGTGCTGCACCATTGGGAAAGGAACTTGAAGATGCCCTAAGAGCAGTGCTTCCAAATGCCACACTTGGTCAGGGTTGTGGCATGACTGAAGCTGGACCAGTGGCTATGTCCCTTAGTTTTGCTAAATACCCATTCAAGGTAAAATCAGGTTCATGTGGAACTGTAATAAGAAATACAGAGATGAAGATTGTGGATCCTCAAACTGGAAAATCTCTTGACAGAAATCTAGCTGGTGAAATTTGTGTAAGAGGGAACCACATTATGAAAGGTTATCTAAATGATCCAGATGCAACAAAGAGCACCATAGATAAAGATGGATGGCTGCACACGGGTGATATTGGTTATGTTGATGATGACGATGAGCTCTTCATTGTTGATAGATTAAAAGAACTCATCAAATACAAAGGGTTCCAAGTTGCACCTGCTGAGCTTGAAGCTTTGCTCCTATCACATCCCAACTTATCAGATGCAGCAGTTGTACCAATGGAAGATGAGGCTGCCGGAGAAGTTCCGGTTGCATTTGTGGTGAAGAAGAATGGTATTAAACTAAACGAGGAAGAAATCAAGCAATACATATCAAAACAGGTGGTGTTCTACAAGAGACTTGCTAAGGTATTTTTCACAGACGCCATTCCTAGAGCTCCATCAGGAAAGGTTTTACGTAAAGACTTGAAAGCTAGGCTCCCAGTTGTCACAGCAGCACAATAA 1638 0.428 MDPKQEFVFRSKLPDIYVPSHLSVHSYCFENLSLSKHRPCLINGSTGEIFTYGEVDLSARRVASGLNKLGIKQGQVIMLLLQNCHQYVFAFLGASYLGAIITSANPLYTSAEIAKQAKASNAKLIITQAAFVDKVYDFAKENGTKLMCVDHHVQSLSILGGLLSFDLLTQADENSMPIVEINPYDIVTLPYSSGTTGMPKGVMLSHESMVTSMSKLVDGENPNLYFHNEDVILCALPMFHIYALHSVLLCGIRAGATVLIMQKFDMVKMFELVQKYKVTIAPFVPPILLGITKNPEVHNYDLSSIRMVISGAAPLGKELEDALRAVLPNATLGQGCGMTEAGPVAMSLSFAKYPFKVKSGSCGTVIRNTEMKIVDPQTGKSLDRNLAGEICVRGNHIMKGYLNDPDATKSTIDKDGWLHTGDIGYVDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPNLSDAAVVPMEDEAAGEVPVAFVVKKNGIKLNEEEIKQYISKQVVFYKRLAKVFFTDAIPRAPSGKVLRKDLKARLPVVTAAQ* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01476 545 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Pte3g01476 545 SUPERFAMILY Acetyl-CoA synthetase-like 11 537 - -
Pte3g01476 545 FunFam Long-chain-fatty-acid--CoA ligase FadD 10 439 - -
Pte3g01476 545 Gene3D - 2 438 IPR042099 -
Pte3g01476 545 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Pte3g01476 545 Pfam AMP-binding enzyme 36 444 IPR000873 -
Pte3g01476 545 Gene3D - 439 540 IPR045851 -
Pte3g01476 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 536 - -
Pte3g01476 545 CDD 4CL 18 534 - -
Pte3g01476 545 FunFam 4-coumarate--CoA ligase 2 440 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01476 Pte-Chr3 13066504 13071125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01476 6 506 Monolignol Biosynthesis Gene Families AT1G51680 63.762 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01476 K01904 - qsa:O6P43_022302 816.994