Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01472 ATGTGGAAGACATTGGGAGAGCTGTTAGGTCTTTCATCAAATCTTCGCCAGCATACAAATCAAATTGTAAGTGCATCAGTGCATGGTGTGCCTGTTGAGTCGCAGAGCTGTGGAGTTTGCCTGGAGGTAAACGAAGTATGCAAGTGTCGGCGTAACTCAGAAGGGACAAAGTGTGAACTGCAAATTGGTCAAGGTGGTGAGCAGAGTTCAGAGGCTAACAGCTCAGTTATTCATGCAGTGATCAACATGGTTGGGATGCTCATAGGTTTGGGGCAACTGTCAACCCCATATGCCCTTGAGAATGGAGGCTGGGCATCTTCATTCCTCCTTGTCGGACTAGGGGTGATTTGTGCGTATAGTTCTCTGTTACTTGGAAAATGCCTTGATAAGAACCACAAGTCAAGAAGCTACATGGATATTGGAGACCATGCATTTGGAAGAAAAGGAAGAATTCTAGCTGCAGCTTTCATATACATGGAGATCTTCATGGCACTCGTGTCGTACACCATATCTTTGCATGATAACCTGTCCACAGTTTTCATGGGGACACAGCTTAACATGAAATGGTCTAAAATAACAACACCTCAGTTTCTAACTGTTATTGCTGTCTTGGTTGCTCTCCCTAGTTTGTGGCTGAGAGATCTGTCCTCCATATCTTTTCTTTCATCTGGAGGCATTCTCATGTCTTCCCTGATTTTTGTTTCTGTGGCATCTACTGCTATCTTTGGAGGTGTCAAAGCTAATCACAAGATACCTGTCTTTCAGCTCCATAATATTCCTTCCATATCAGGCATCTATATTTTCAGCTATGCAGGCCATATTGTCTTCCCCAACTTATACAAAGCTATGAAAGACCCCAGAAAATTTACCAAGGTAACCATAGTGAGCTTCACATTGGTCACGTCACTCTATACTTTTTTTGCATTCTTGGGAGCCAAGTTGTTTGGAGCTGATGTCAATTCCCAGATAACTCTTAGCATGCCTAGACACTTCATCATGACAAAGGTTGCACTGTGGGCTACAGTGCTTACCCCAATGACCAAATATGCACTTGAATTTGCACCCTTTGCAATTCAGCTTGAGCATAACATCCTTCCCAACTCCATGAGTCAGAGAACCAAAATGATTATAAGGGGTTGTGTAGGCTCGACTTCACTCTTGATCATTCTAGCTCTTGCTCTTTCTGTGCCATATTTCCAACATGTTCTGAGTCTCACTGGCTCACTAGTGAGTTTTGCTATATGTGTTATTCTGCCATGTGCTTTCTATACCAAGATATGTTGGGGACAGACGAGGAGATCTCTTCTTGTCATAAACATCAGCCTCATTGTGTTTGGATTTTTTCTTGGAATTTTGGGAACTTACTCCTCTTCAAAGATGCTTCTTAAAATCTTAGAAGGATCTCATTCCAGTGATTGA 1419 0.4257 MWKTLGELLGLSSNLRQHTNQIVSASVHGVPVESQSCGVCLEVNEVCKCRRNSEGTKCELQIGQGGEQSSEANSSVIHAVINMVGMLIGLGQLSTPYALENGGWASSFLLVGLGVICAYSSLLLGKCLDKNHKSRSYMDIGDHAFGRKGRILAAAFIYMEIFMALVSYTISLHDNLSTVFMGTQLNMKWSKITTPQFLTVIAVLVALPSLWLRDLSSISFLSSGGILMSSLIFVSVASTAIFGGVKANHKIPVFQLHNIPSISGIYIFSYAGHIVFPNLYKAMKDPRKFTKVTIVSFTLVTSLYTFFAFLGAKLFGADVNSQITLSMPRHFIMTKVALWATVLTPMTKYALEFAPFAIQLEHNILPNSMSQRTKMIIRGCVGSTSLLIILALALSVPYFQHVLSLTGSLVSFAICVILPCAFYTKICWGQTRRSLLVINISLIVFGFFLGILGTYSSSKMLLKILEGSHSSD* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01472 472 PANTHER AMINO ACID TRANSPORTER 67 455 - -
Pte3g01472 472 Pfam Transmembrane amino acid transporter protein 73 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01472 Pte-Chr3 12966941 12968739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01472 37 469 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.277 5.11e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01472 - - qsa:O6P43_023620 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01472 3 12966941 12968739 Pte3g01472 3 12966941 12968739 RCT