Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01470 ATGATGGAGGGTTGGATGTGTTCAGTGTTATGCTTGCTGGTTTCAATTGCTTCTTTGTTGACTTGCATGGCTGACAACAAAAATGGCATACCTACACAACTCAATGATGATGTTCTAGGTTTGATTGTTTTCAAATCTGAGCTTCAAGATCCCTTCTCACATCTTGCTTCATGGAGTGAAGATGATGACAACCCTTGTTCATGGAAATATGTTCTGTGCAATGATATCAATGGCAGAGTTTCTGAGTTGGCAATGGATAGCTTAAGCTTATCTGGGAAACTTGGTAGAGGTCTTGAGAAGTTGCAATACTTAAAGGTACTGTCTTTGTCAACCAACAATTTCACAGGTATTAGTCCTGCATTTGGTCTCAGTGATAGTGTACAAAAGCTAAACCTTAGTCACAATCGTCTTTCTGAACTTATTCCTACTTCTCTAGTAAATCTTAGTTCCTTAGGGGTCCTTGATTTATCAGAAAACTCATTCTCAGGACCAGTCCAAGACAACATGTTTGACAGGTGTTCTTCCCTTCATTACTTGTCTTTAGCTGGAAACATGTTGGAAGGACCCATTCCTAGTACACTGTCCAGATGTTCCTTGTTGAACAACCTTAATCTTTCCGGAAATCGTTTTGCCGGTGACCCAGGTTTTAGTTCTGGGATTTATTCAATGAAAAAACTTAGAACTTTGGACCTTTCATCCAATGCATTTTCAGGTTCAGTTCCTGCTGGCATATCAGGCCTACATTTCCTTAGAGAGATCTTGTTACAGGGAAATCACTTTACAGGTTCATTACCTACTGATCTCGGATTATGCACCCATTTGAATAGATTGGATTTCAGTGATAATATGTTTAATGGTGGATTACCTGAGACAATTCAGAGGCTAAATTCTTTGACAACTTTGAAGATATCAAATAATCAGTTAATGGGTGAATTCCCTCAGTGGATTACTGACATGATTAGTTTGGAATATGTTGAACTTTCAAATAATGGCTTTACTGGAGCTCTTCCAGCATCACTAGGTGAAATAAGATCACTGAATGTTCTGATTTTGTCAAGTAATAAACTTGGTGGAAATATTCCAATGTCATTGAGTTACTGTACCAAACTCTCAGTTCTTGGGCTTAGAGACAACAGCTTCAGTGGCAGTGTACCTGAAGGCTTGTTTGGTCTAGGATTGAAGGAAGTGGACTTATCAAACAATCAACTCATGGGTTCTATTCCACAAGGTTCAGGTAGAATCTTTGAAAGTCTTTCTGTATTGGACCTTTCCAGAAATGATTTCCATGGAAACATCCCTGCAGAAGTGGGGCTTTTCTCAAACCTGAGGTACTTAAATCTCTCTTGGAATAATCTACAATCAAGGATGCCCCCAGAGCTGGGGTTCTCTCAGAACCTAACAGTCTTGGATCTCCGGAAAAACCGTCTCAGTGGTTCCATTCCGGGAGATATTTGTGATTCAGCCAGTCTGGGAATTCTTCAATTAGATGGAAATGAGCTCAGTGGATCAATCCCAGAAGAGATTGGAAACTGTTCATCTCTCTACTTGCTGAGCTTGTCCCATAATAATTTGACTGGCTCAATCCCCAAATCCATGTCAATGTTAAGTAAGCTCAAAATTTTGAACTTAGAGTTCAATGAACTTGAAGGTGAAATACCACAGGAGCTTGGAATACTTGACAATCTACTTGCTGCTAATGTCTCATACAACAGACTTGTCGGCAGGCTCCCCATTGGTAGTATATTTCCCCACCTGGACAGCAGCTCATTGGAAGGAAACTTAGGTCTTTGCTCACCATTGTTGAAGGGCCCATGTAAACTGAATGTTCCAAAGCCTCTAGTGCTTGATCCTAATGCATTTGGAAGCCAAATAAGTCATCATAATGACAGCAATGAATCTTCTTTACCAAGTAAAGTCCATAGGCGCCGCAGTTTCTTCAGCATTTCGGCAATTGTAGCCATTTCTGCTGCGTTTATGATTGCAATAGGGGTCATAGTAATTACACTTCTTAATGTATCTGTGAGGAAGAGGCTAGAATTTGTGGACAACGCCTTGGAAAGCATGTGCTCTAGTTCTTCAAGATCAGGATGTACCCCCACAGGAAAGCTCGTTTTGTTCGATAAGCAGACATCGCCGGATTGGATCAGCAATCCAGAATCTTTGCTCAGCAAGTCATCCCAGATAGGCGAAGGACTCTTTGGAACTGTGTACAAGGTTCCATTGGGATCACAAGGAAGAGTTGCAGCTATCAAAAGGCTTGTCACCACAAATCTAATCCAGTATCCCGAAGATTTCGATAGGGAAGTTCGGGTGCTAGGAAAAGCCAGGCACCCGAATTTGATAGCTGTGAAAGGATACTACTGGACTCCTCAAATTCAACTTCTGGTGACAGAATATGCACCAAATGGCAGCCTGCAGATGAAGCTTCATGAAAGGCTTCCTTCTGCTCCTTCACTTTCTTGGGCCAACAGATTCAAAATATTGCTCGGAACAGCAAAAGGACTAGCATACTTGCATCAATCAGTTCATCCACCCATCATCCATTACAACTTGAAACCAAACAACATTCTGCTTGATGAGGATTACAATGCCAAGATTTCGGATTTCGGATTAGCAAGGCTACTGATAAAGCTGGACAAGCATGTGATGAGCAACAGATTTCAAAGTGCACTGGGATACATGGCACCAGAGTTGGCGTGTCAACGCTTAAGAGTCAATGAAAAATGTGATGTTTATGGTTTTGGGGTGATGATCCTTGAGGTTGTGACTGGAAGAAAGCCTGTAGAATATGGAGAAGACAACGTTGTTATACTGAATGATCATGTGAGAGTTCTGTTAGAACAAGGTAATGTTCTTGATTGTGTGGATCAAAGCATGTCTGAATATTCAGAAGATGAAATATTGCCTGTGCTCAAGTTGGCAATGGTTTGCACATCACAGATACCTTCAACTAGGCCTTCTATGGCTGAAGTGGTGCAGATATTGGAAGTGATTAAGGCTCCTGTCCCTCAGAGAATGGAATTGTTTTAG 3030 0.4122 MMEGWMCSVLCLLVSIASLLTCMADNKNGIPTQLNDDVLGLIVFKSELQDPFSHLASWSEDDDNPCSWKYVLCNDINGRVSELAMDSLSLSGKLGRGLEKLQYLKVLSLSTNNFTGISPAFGLSDSVQKLNLSHNRLSELIPTSLVNLSSLGVLDLSENSFSGPVQDNMFDRCSSLHYLSLAGNMLEGPIPSTLSRCSLLNNLNLSGNRFAGDPGFSSGIYSMKKLRTLDLSSNAFSGSVPAGISGLHFLREILLQGNHFTGSLPTDLGLCTHLNRLDFSDNMFNGGLPETIQRLNSLTTLKISNNQLMGEFPQWITDMISLEYVELSNNGFTGALPASLGEIRSLNVLILSSNKLGGNIPMSLSYCTKLSVLGLRDNSFSGSVPEGLFGLGLKEVDLSNNQLMGSIPQGSGRIFESLSVLDLSRNDFHGNIPAEVGLFSNLRYLNLSWNNLQSRMPPELGFSQNLTVLDLRKNRLSGSIPGDICDSASLGILQLDGNELSGSIPEEIGNCSSLYLLSLSHNNLTGSIPKSMSMLSKLKILNLEFNELEGEIPQELGILDNLLAANVSYNRLVGRLPIGSIFPHLDSSSLEGNLGLCSPLLKGPCKLNVPKPLVLDPNAFGSQISHHNDSNESSLPSKVHRRRSFFSISAIVAISAAFMIAIGVIVITLLNVSVRKRLEFVDNALESMCSSSSRSGCTPTGKLVLFDKQTSPDWISNPESLLSKSSQIGEGLFGTVYKVPLGSQGRVAAIKRLVTTNLIQYPEDFDREVRVLGKARHPNLIAVKGYYWTPQIQLLVTEYAPNGSLQMKLHERLPSAPSLSWANRFKILLGTAKGLAYLHQSVHPPIIHYNLKPNNILLDEDYNAKISDFGLARLLIKLDKHVMSNRFQSALGYMAPELACQRLRVNEKCDVYGFGVMILEVVTGRKPVEYGEDNVVILNDHVRVLLEQGNVLDCVDQSMSEYSEDEILPVLKLAMVCTSQIPSTRPSMAEVVQILEVIKAPVPQRMELF* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01470 1009 Pfam Protein kinase domain 724 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01470 1009 FunFam Inactive leucine-rich repeat receptor-like protein kinase 315 608 - -
Pte3g01470 1009 PANTHER RECEPTOR-LIKE PROTEIN 55 334 998 - -
Pte3g01470 1009 SUPERFAMILY L domain-like 46 404 - -
Pte3g01470 1009 Gene3D Ribonuclease Inhibitor 35 189 IPR032675 -
Pte3g01470 1009 Pfam Leucine rich repeat 126 186 IPR001611 GO:0005515
Pte3g01470 1009 FunFam Leucine-rich repeat receptor-like protein kinase 34 192 - -
Pte3g01470 1009 SUPERFAMILY L domain-like 319 590 - -
Pte3g01470 1009 Pfam Leucine Rich Repeat 441 458 IPR001611 GO:0005515
Pte3g01470 1009 ProSitePatterns Protein kinases ATP-binding region signature. 728 751 IPR017441 GO:0005524
Pte3g01470 1009 FunFam Inactive leucine-rich repeat receptor-like protein kinase 216 314 - -
Pte3g01470 1009 Gene3D Phosphorylase Kinase; domain 1 722 803 - -
Pte3g01470 1009 SMART LRR_typ_2 126 147 IPR003591 -
Pte3g01470 1009 SMART LRR_typ_2 535 559 IPR003591 -
Pte3g01470 1009 SMART LRR_typ_2 464 487 IPR003591 -
Pte3g01470 1009 SMART LRR_typ_2 439 463 IPR003591 -
Pte3g01470 1009 SMART LRR_typ_2 223 247 IPR003591 -
Pte3g01470 1009 SMART LRR_typ_2 101 123 IPR003591 -
Pte3g01470 1009 SMART LRR_typ_2 148 172 IPR003591 -
Pte3g01470 1009 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Pte3g01470 1009 SUPERFAMILY Protein kinase-like (PK-like) 723 1003 IPR011009 -
Pte3g01470 1009 ProSiteProfiles Protein kinase domain profile. 722 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01470 1009 Gene3D Ribonuclease Inhibitor 320 608 IPR032675 -
Pte3g01470 1009 Gene3D Ribonuclease Inhibitor 190 319 IPR032675 -
Pte3g01470 1009 Gene3D Transferase(Phosphotransferase) domain 1 804 1006 - -
Pte3g01470 1009 CDD STKc_IRAK 728 996 - -
Pte3g01470 1009 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 800 1004 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01470 Pte-Chr3 12943440 12946896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01470 20 1006 Receptor kinase-like Gene Family AT3G28040 62.725 0.0 1217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pte3g01470 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01470 - - gmx:100813764 1432.93