LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte3g01464	ATGTTGAAATTGCACACGACAAGAAGTTGGGATTTCCTGGGAATTACATTGGAGAATACCAGAGTTCCTCAAATGCAGCTAACGTATGGTGAAAACATCATCGTTGGAATCTTGGACACAGGGTTTGAGCTACAAAACAGGCCCATAGGAATCCGCAAGGCTATGAGCCATTCCAGTACTGGTGATCGGGACGATAACTCTGAATACCGGTCAGCTCGAGACTTTGTTGGCCATGGGACGCACACAGCTTCCACAGCAGTAGGATCCATAGTGAAAGATGCAAGTTTCTATGGGTTAGGGAAAGGCACTGCCAGGGGTGGAGCTCCTAGGGCTCGTCTTGCCATTTACAAGGTTTGCTGGGCAGACAATAATGATTACGGCTCCGGCAGGTGCTCTGAAGCTGATGTAATGGCAGCTTTCGATGATGCGTTGAATGACGGAGTTCACATTATCTCAGCTTCATTGGGTGAAACTCCACCGCTGACTCCATTCTTCAAACTAAGCGCAAGCATCGGTTCCTTTCATGCCATGCAGAAAGGTGTCACTGTGGTTTTCTCAGCGGGAAACTATGATGAGTCCCCTGACCCATCTCTTGTTGCAAATGTTTCTCCATGGGCTATTTGTGTGGCTGCTTCATCCATTGATCGCACCTTTGCAACACAAATGCTTGTTGGTGACAGTCTTTACGTGACGTTATGTATCGACAGTGCAATAATTATAAATATTCACTATTGCAGGATATGCAACGTCGAGAATATTAATAAACTGACCAGATTAGCTTCAGGAAGGATAGTCCTTTGCTTCTCTACAAATGGACCCAAATCAAGTGGAGAGGCGGCCACAGCGGTTCAGGCTGTAAATGGATCAGCTTTGATATTTGTCCAGACATTGACAAGGCAAATACCCGATGTGGAAGTCATTCCTACTCTGCTCATTAACTTGGAACAAGGCACTAAGATTAAGCATTATCTTGCTCAATCCCAAAGGCTCCCGCCTGTGCAAATAGAGCCAAGCAAAGCTGTCATTGGAAAATCACCAGCACCCGCAGTTGCCTACTTCTCTTCTAGGGGACCAAGCTCAATCGCACCCGACATTCTCAAGCCAGACATGAGTGCCCCCGGTGTCAGCATTTTAGCAGCTTGGCCACCTGGAACCCCACCTTCCGTGTCAGCTGGTGATGGCCGTTCCGTACATTGGAATTTTCAATCTGGAACATCTATGTCCTGCCCACATGTCTCTGGTGTGGCTGCACTACTCAATTCAGCCAATCCAACTTGGTCTCCTGCAGTCATCAAGTCTGCTCTCATGACAACAGCGTACAATAGAGACAGTACATCAGACAACATTATAGCTGGTGGATCCATGAGAGTTGCCAATACGTTTGATATTGGAGCGGGTCATATAAACCCTTTAAAAGCAATGGATCCAGGGCTAGTTTACGATATGAAAACTAGGGATCATATTATTTTCCTCTGCAACCTAGGCTACACACAAGAACAAATAAAGAACATGGTTCTTCCTTCTCCCTCCCAAATTGACACGTCATGTCCAAATTCAGAAACAAACCCGAATTCCAACATAAACTATCCTTCCATCACAGTCTCCAATCTGAAATCGACCACTACAATCAGAAGGACTGTCCGTAATGTAGGCAAAGTGAAGGGTGTGATATATTTTTCTAGAGTTGTAAAACCTCATGGAGTGGAGGTTGTGGTATGGCCTAAGGTATTGTTTTTCTCATGTTGTAAAGATGAAAACTCGTACTACGTGAGTTTCATACCAACCAAGAAGTCTCGAGGAAGATATGATTTTGGGGAGATAGTCTGGAGTGATGGCATTCATTATGTGAGAAGTCCACTGGCTGTACTTGTGAACAAAGTTAATGCGAATATGCTTACGATTCCACCGCTAGATAGCTCATGA	1923	0.4519	MLKLHTTRSWDFLGITLENTRVPQMQLTYGENIIVGILDTGFELQNRPIGIRKAMSHSSTGDRDDNSEYRSARDFVGHGTHTASTAVGSIVKDASFYGLGKGTARGGAPRARLAIYKVCWADNNDYGSGRCSEADVMAAFDDALNDGVHIISASLGETPPLTPFFKLSASIGSFHAMQKGVTVVFSAGNYDESPDPSLVANVSPWAICVAASSIDRTFATQMLVGDSLYVTLCIDSAIIINIHYCRICNVENINKLTRLASGRIVLCFSTNGPKSSGEAATAVQAVNGSALIFVQTLTRQIPDVEVIPTLLINLEQGTKIKHYLAQSQRLPPVQIEPSKAVIGKSPAPAVAYFSSRGPSSIAPDILKPDMSAPGVSILAAWPPGTPPSVSAGDGRSVHWNFQSGTSMSCPHVSGVAALLNSANPTWSPAVIKSALMTTAYNRDSTSDNIIAGGSMRVANTFDIGAGHINPLKAMDPGLVYDMKTRDHIIFLCNLGYTQEQIKNMVLPSPSQIDTSCPNSETNPNSNINYPSITVSNLKSTTTIRRTVRNVGKVKGVIYFSRVVKPHGVEVVVWPKVLFFSCCKDENSYYVSFIPTKKSRGRYDFGEIVWSDGIHYVRSPLAVLVNKVNANMLTIPPLDSS*	641

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte3g01464	640	CDD	PA_subtilisin_like	221	327	-	-
	Pte3g01464	640	Gene3D	-	491	624	-	-
	Pte3g01464	640	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	2	622	IPR045051	-
	Pte3g01464	640	CDD	Peptidases_S8_3	2	440	IPR034197	-
	Pte3g01464	640	Pfam	Fibronectin type-III domain	526	622	IPR041469	-
	Pte3g01464	640	Gene3D	-	215	342	-	-
	Pte3g01464	640	Pfam	Subtilase family	30	448	IPR000209	GO:0006508\|GO:0008236
	Pte3g01464	640	SUPERFAMILY	Subtilisin-like	4	478	IPR036852	GO:0004252\|GO:0006508
	Pte3g01464	640	ProSiteProfiles	Serine proteases, subtilase domain profile.	9	474	-	-
	Pte3g01464	640	ProSitePatterns	Serine proteases, subtilase family, serine active site.	404	414	IPR023828	-
	Pte3g01464	640	Gene3D	Peptidase S8/S53 domain	41	486	IPR036852	GO:0004252\|GO:0006508
	Pte3g01464	640	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	35	46	IPR023827	-
	Pte3g01464	640	FunFam	Subtilisin-like protease SBT1.5	491	625	-	-
	Pte3g01464	640	PRINTS	Subtilisin serine protease family (S8) signature	30	49	IPR015500	-
	Pte3g01464	640	PRINTS	Subtilisin serine protease family (S8) signature	403	419	IPR015500	-
	Pte3g01464	640	PRINTS	Subtilisin serine protease family (S8) signature	74	87	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte3g01464	Pte-Chr3	12891705	12894863	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte3g01464	2	632	Subtilisin-like Serine Gene Family	AT4G26330	51.466	0.0	660

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte3g01464	-		-	qsa:O6P43_022039	858.211