Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01449 ATGAAAGGTGGAAGGTCTAAGAGCGAATCTAAGAAAGCCGATGCTAAGCTTGCGGTGAATAAGAAAGGAGCCACCAAGGGTGGAAAATCTAGTAAAGGAAAGGCAGCCAAAGATCCTAACAAGCCGAAGAGGCCCGCCAGTGCCTTCTTCGTTTTCATGGAGGAGTTCAGGAAACAATTCAACATGGAGAATCCCGGGAACAAAGCAGTATCTGCTGTCGGCAAGGCTGCTGGAGCAAAATGGAAGACCATGTCTGTTGCCGAGAAACAACCTTTTGTGCTGAAGGCTGAGAGGCGTAAGGCTGATTATGAGAAGAACATGAAAGCCTATAATAAGAGACAGGCTGAAGGTCACAACGCTGCAGAGGAAGAGGAATCAGAAAAGTCAGTATCTGAAGTGAATGATGAAGATGATGTAGAAGAAGATGGTAGTGACGAGGATGAGGACGACGAGTAG 456 0.4671 MKGGRSKSESKKADAKLAVNKKGATKGGKSSKGKAAKDPNKPKRPASAFFVFMEEFRKQFNMENPGNKAVSAVGKAAGAKWKTMSVAEKQPFVLKAERRKADYEKNMKAYNKRQAEGHNAAEEEESEKSVSEVNDEDDVEEDGSDEDEDDE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01449 151 Coils Coil 93 113 - -
Pte3g01449 151 MobiDBLite consensus disorder prediction 99 151 - -
Pte3g01449 151 Gene3D High mobility group box domain 25 128 IPR036910 -
Pte3g01449 151 Pfam HMG (high mobility group) box 42 111 IPR009071 -
Pte3g01449 151 MobiDBLite consensus disorder prediction 128 151 - -
Pte3g01449 151 MobiDBLite consensus disorder prediction 1 46 - -
Pte3g01449 151 MobiDBLite consensus disorder prediction 1 19 - -
Pte3g01449 151 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 42 111 IPR009071 -
Pte3g01449 151 SMART hmgende2 41 112 IPR009071 -
Pte3g01449 151 SUPERFAMILY HMG-box 29 116 IPR036910 -
Pte3g01449 151 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 145 IPR031061 -
Pte3g01449 151 MobiDBLite consensus disorder prediction 99 127 - -
Pte3g01449 151 CDD HMG-box_AtHMGB1-like 43 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01449 Pte-Chr3 12690150 12693512 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Pte3g01449 HMG_box 1.5e-21 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01449 K25507 - qsa:O6P43_018776 181.8