Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01445 ATGGTGGCTGCCCTTCCTATCCGTCGCCAGCTTCTGTCCAGTCTCAAATATCGTTTTTCAGAGATCCCCGCACGCAGGCAATCACCTTTCTTACTTTATGAATTCCCCTCTGATCGCTTCACGGCTACCAAAGTGGTCCGTGGTTATCTAGGGAACTCTCTTTCACAGACTAGAACCTATGTGCGTCACTCGATGATCGCCATGGACCACGAGAAACAGTTCAGTAAGAGCACAGAAGGCGCAACGATTCGTTGCAGAGCTGCGGTTTGTCGAGCTGCTGGAGAACCTTTGGCGATCGAGGAGATCATGGTTGCACCGCCCATGCCAGCCGAAGTTCGTATCAAGGTTATATGCACCTCTCTCTGTCGTACTGATGTCAGTGGCTGGAAAAGGAAGGGACCTCTTGGACTGTTTCCCAGAATTCTTGGTCACGAAGCTGTCGGAGTTGTGGAAAGTGTAGGTAAGGATGTGAATGAAGTGAGAGCAGGAGACGTGGTTATTCCTTCGTTCTTGTCAGAATGTGAAGAATGCGCAGACTGTAGATCAGAAAAGAGCAATCTTTGCTCTAAGATCCCTTTCAAGATATCTCCTTGGATGCCCAGACACGAGACCAGCAGGTTCACTGATCTCAATGGCAAAGTTCTGCACCATTTTATGTTTGTGTCGAGTTTTTCAGAGTACACGGTGGTAGACATTGCCCATTTAACAAAGATTGACCCAACGATTCCTCCAGACAGGGCTTGCCTCCTCAGTTGCGGAGTATCGACTGGGGTAGGGGGTGCTTGGAGAAAGGCAAATGTACAGGCAGGATCAACCGTCGCCATATTTGGATTGGGCACCATAGGATTAGCTGTTGCTGAGGGAGCAAGACTCTGTGGAGCATCTAAAATTATAGGAGTGGATTTAAACTCAGACAAGTTTGAAATGGGCAAAAAATTTGGAGTCACAGACTTTGTCCATGCTGGAAAATCTACGGATACATCTGTGAGTGAGAAGATCATGAAGATGACAGGAGGAGTAGGTGCTGACTATTGCTTTGAATGTGTTGGGATGACATCGTTGGTCCAAGAAGCTTATCTTTGCTGTCGAAAGGGTTGGGGGAAGACGATTGTTTTGGGTTTGGACAAGCCAGAGTCGGAGATTAGCTTGAGCTCATATCATGTGCTTCTGAGTGGGAAAAGCCTTACAGGATGCATGTTGGGAGGGATCAAACCAAAATCGGATATCCCTATTCTTCTGAAACGTTATAAGAACAAGGAGCTGAATCTGGATGAGTTTGTAACTCACAAAGTTAACTTCGAAAATATCAACGAAGCTTTTGAACTACTTTCCGGAGGGAAGTGCCTTAGATGCGTGATTTGGATGGACAAGTAA 1374 0.4665 MVAALPIRRQLLSSLKYRFSEIPARRQSPFLLYEFPSDRFTATKVVRGYLGNSLSQTRTYVRHSMIAMDHEKQFSKSTEGATIRCRAAVCRAAGEPLAIEEIMVAPPMPAEVRIKVICTSLCRTDVSGWKRKGPLGLFPRILGHEAVGVVESVGKDVNEVRAGDVVIPSFLSECEECADCRSEKSNLCSKIPFKISPWMPRHETSRFTDLNGKVLHHFMFVSSFSEYTVVDIAHLTKIDPTIPPDRACLLSCGVSTGVGGAWRKANVQAGSTVAIFGLGTIGLAVAEGARLCGASKIIGVDLNSDKFEMGKKFGVTDFVHAGKSTDTSVSEKIMKMTGGVGADYCFECVGMTSLVQEAYLCCRKGWGKTIVLGLDKPESEISLSSYHVLLSGKSLTGCMLGGIKPKSDIPILLKRYKNKELNLDEFVTHKVNFENINEAFELLSGGKCLRCVIWMDK* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01445 457 Gene3D - 88 450 - -
Pte3g01445 457 Gene3D - 257 398 - -
Pte3g01445 457 SUPERFAMILY GroES-like 406 454 IPR011032 -
Pte3g01445 457 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 242 418 IPR036291 -
Pte3g01445 457 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 143 157 IPR002328 GO:0008270|GO:0016491
Pte3g01445 457 Pfam Zinc-binding dehydrogenase 281 407 IPR013149 -
Pte3g01445 457 FunFam Alcohol dehydrogenase 6 88 273 - -
Pte3g01445 457 FunFam S-(hydroxymethyl)glutathione dehydrogenase 257 398 - -
Pte3g01445 457 PANTHER ALCOHOL DEHYDROGENASE 81 453 - -
Pte3g01445 457 Pfam Alcohol dehydrogenase GroES-like domain 110 237 IPR013154 -
Pte3g01445 457 SUPERFAMILY GroES-like 78 267 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01445 Pte-Chr3 12652646 12658070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01445 111 252 Monolignol Biosynthesis Gene Families AT4G37970 28.276 3.56e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01445 K00121 - qsu:112018306 597.045