Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01441 ATGTCTGGCGGAAGTATGTATGACCTTATTCATAGAGAGAAAGCCGTTCTTACTCTTCCTTCCTTACTCAAAGTAGCCATTGATGTTTCTGAAGGAATGAACTACCTGCATCAAAACAATGTCATACATAGGGACCTTAAAGCTGCCAATCTACTGGTGGATAGAAATAATGTTGTTAAGGTTGCCGATTTTGGTGTAGCTAGAATGCAAACTGATTCTGGAATAATGACTGCAGAAACTGGAACATATCGTTGGATGGCTCCAGAGGTCATTGAACACAAACCGTATGGTCTTAAGGCTGACGTTTTTAGCTTTGGAATTGTTTTATGGGAGCTGCTTACTGGGAAGATCCCTTATGACAATCTGAGCCCATTACAAGCAGCCGTCGGGGTTGTCCAGAAGGGTTTGAGACCTGAAATTCCAGTCCATACACATCCACAGTTAGTGCAACTGCTCGAGCGATGTTGGCACAAGGATCCTTGTCAGAGACCTGAATTCTCAGAAATTCTCAAATTTCTGCGGCATATTGCTCATGACGTTGCCGAAGAAAGGGCGGTTCGTCATGAAAAAGAAACATCTACAAGTTCATCTGCTTATGGTGCGATTTAG 609 0.4302 MSGGSMYDLIHREKAVLTLPSLLKVAIDVSEGMNYLHQNNVIHRDLKAANLLVDRNNVVKVADFGVARMQTDSGIMTAETGTYRWMAPEVIEHKPYGLKADVFSFGIVLWELLTGKIPYDNLSPLQAAVGVVQKGLRPEIPVHTHPQLVQLLERCWHKDPCQRPEFSEILKFLRHIAHDVAEERAVRHEKETSTSSSAYGAI* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01441 202 PRINTS Tyrosine kinase catalytic domain signature 144 166 IPR001245 GO:0004672|GO:0006468
Pte3g01441 202 PRINTS Tyrosine kinase catalytic domain signature 100 122 IPR001245 GO:0004672|GO:0006468
Pte3g01441 202 PRINTS Tyrosine kinase catalytic domain signature 35 53 IPR001245 GO:0004672|GO:0006468
Pte3g01441 202 PRINTS Tyrosine kinase catalytic domain signature 81 91 IPR001245 GO:0004672|GO:0006468
Pte3g01441 202 SUPERFAMILY Protein kinase-like (PK-like) 1 184 IPR011009 -
Pte3g01441 202 CDD STKc_MAP3K-like 1 173 - -
Pte3g01441 202 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 183 - -
Pte3g01441 202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Pte3g01441 202 Gene3D Transferase(Phosphotransferase) domain 1 2 200 - -
Pte3g01441 202 SMART serkin_6 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01441 202 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01441 202 Pfam Protein tyrosine and serine/threonine kinase 1 173 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01441 Pte-Chr3 12609679 12611344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01441 1 189 MAP Kinase Kinase Kinase AT4G35780 67.196 7.30e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte3g01441 PK_Tyr_Ser-Thr 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01441 - - qsa:O6P43_016321 322.398