Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01439 ATGAAGAAACCCGCAAGTTTTTCAAGCACTCCTCTGTTTCGTGTGTACTGTCACCTCGATATGCCAGCAGTTGTTGGAACCCTCTTCACACATCATCAGAAATGTGTGATAGTGGATACTCAAGCAACTGGTAACAACAGAAAGATAACTGCGTTTATAGGAGGTCTAGACCTTTGTGATGGACGATATGATACACCAGAGCATAGACTTTTTCGTGATGTGGATACTGTCTATAAGGATGATTACCACAATCCAACATTGGCCGGGGGAACGAAAGGTCCAAGGGAACCATGGCACGATCAACATTGCAAAATTGAGGGGCCTGCTGCATATGATATACTTACCAATTTTGAGCAGCGCTGGAGGAAAGCCACCAAATGGTCAGAGTTAGGGAAACGTTTCAAAAGGGTTTCTCACTGGCACGATGATTCCTTGATAAAGTTAGAGCGCATCTCATGGATTCTTAGTCCCAGCGCATCTATTCCAAATGATGATCCTACATTATGGGTGTCAAAGGAAGATGAACCTGAGAACTGGCATGTTCAGGTCTTCAGGTCTATTGATTCCGGTTCTCTCAAAGGGTTTCCGAAAGATATCCGTGAAGCTGAAAAGCAGAATCTTGTTTGTGCAAAAAGTTTGGTTGTTGACAAGAGTATTCAAACAGCATACGTCCAGGCAATCAGATCAGCTCAGCACTTCGTTTACATTGAAAATCAGTATTTTCTTGGATCATCTTATGCATGGCCATCTTACAAGGAAGCAGGTGCCGACAACTTAATCCCTGCGGAGTTGGCTTTGAAGATAGTTAGTAAGATAAGAGCCAGGGAGCGATTTTCCGTTTATGTTGTCATACCCATGTGGCCAGAAGGTGTTCCTTCTTCAGCCTCGGTGCAAGAGATTCTATTCTGGCAGAGTCAGACTATGAAAATGATGTATCAAACAATAGCAAAGGAATTGGAATCGCTAAACCTTGAGAATGCACATCCACAAGACTACCTCAATTTCTACTGTCTAGGAAAACGTGAGAAGTTTCCTGAAGTTTCAATTACGGCTCCTCCGCTTAATGGAGAAACGGTTTCAGCCTCACAAAAATTCCAACGTTTCATGATATATGTTCACGCCAAGGGCATGATTGTAGATGATGAATATGTGATAGTCGGTTCGGCAAATATCAATCAAAGATCTTTGGCTGGCTCACGAGATACAGAGATAGCTATGGGTGCCTATCAACCTTATTACACGTGGGGTAAGAAAAAGGAACATCCACATGGTCAGGTTTACGGGTACCGAATGTCTCTATGGGCAGAACACTTGGGCTGTTTAGATGAAAGCTTCCGCGAACCAGAGAGCTTAGCTTGTGTAAGAAATGTGAACAAGATTGCACAAGACAACTGGGACAAGTACAAAGCAGAAGAACTTATCCAATTGCAGGGGCACCTCTTGAAGTATCCGGTTCGTGTCGATGCCGATGGGAAAGTAAGCCCATTAACGGGGCAAGAGACATTTCCAGATGTAGGGGGCAAAGTACTAGGCTCAAGAACGACCCTTCCCGATGCTCTAACTACATAG 1569 0.4385 MKKPASFSSTPLFRVYCHLDMPAVVGTLFTHHQKCVIVDTQATGNNRKITAFIGGLDLCDGRYDTPEHRLFRDVDTVYKDDYHNPTLAGGTKGPREPWHDQHCKIEGPAAYDILTNFEQRWRKATKWSELGKRFKRVSHWHDDSLIKLERISWILSPSASIPNDDPTLWVSKEDEPENWHVQVFRSIDSGSLKGFPKDIREAEKQNLVCAKSLVVDKSIQTAYVQAIRSAQHFVYIENQYFLGSSYAWPSYKEAGADNLIPAELALKIVSKIRARERFSVYVVIPMWPEGVPSSASVQEILFWQSQTMKMMYQTIAKELESLNLENAHPQDYLNFYCLGKREKFPEVSITAPPLNGETVSASQKFQRFMIYVHAKGMIVDDEYVIVGSANINQRSLAGSRDTEIAMGAYQPYYTWGKKKEHPHGQVYGYRMSLWAEHLGCLDESFREPESLACVRNVNKIAQDNWDKYKAEELIQLQGHLLKYPVRVDADGKVSPLTGQETFPDVGGKVLGSRTTLPDALTT* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01439 522 PANTHER PHOSPHOLIPASE D 23 513 IPR015679 -
Pte3g01439 522 Pfam Phospholipase D Active site motif 369 395 IPR001736 GO:0003824
Pte3g01439 522 Pfam Phospholipase D Active site motif 28 62 IPR001736 GO:0003824
Pte3g01439 522 Gene3D Endonuclease Chain A 9 145 - -
Pte3g01439 522 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 368 395 IPR001736 GO:0003824
Pte3g01439 522 Pfam Phospholipase D C terminal 442 512 IPR024632 -
Pte3g01439 522 SMART pld_4 368 395 IPR001736 GO:0003824
Pte3g01439 522 SMART pld_4 27 62 IPR001736 GO:0003824
Pte3g01439 522 SUPERFAMILY Phospholipase D/nuclease 25 131 - -
Pte3g01439 522 Gene3D Endonuclease Chain A 176 411 - -
Pte3g01439 522 SUPERFAMILY Phospholipase D/nuclease 216 453 - -
Pte3g01439 522 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 27 62 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01439 Pte-Chr3 12585866 12589752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01439 25 523 Phospholipase D Gene Family (Wang group) AT2G42010 57.467 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01439 K01115 - jre:108981014 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01439 3 12585866 12589752 Pte3g01439 3 12585866 12589752 RCT