Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01438 ATGGCGGGCGAGGAATCCAATGAAACAGTATACCTTCATGGAGACCTTGATCTGAGAATCATTGAAGCTCGTTGTTTACCAAACATGGACTTGGTTTCCGAACGCATACGTAGATTCGTTTCCCTCTTGAATCCGTGCCGTTTTCAGTTCCCTCTAAAACAGAAACACCACCACCACCAACAGCATTCTCTTAAGAACATGATTACCAGCGATCCTTACGTTACAGTTTGCTTAGCTGGGGCTACCGTAGCTCGAACGCGTGTTATCTCCAACTGTCAGAATCCGATATGGGAAGAGCATTTTAAGATTCCACTTGCGCACCCTGTCTCGCAGGTTGAATTCCACGTCAAGGACAACGATGTCTTTGGCGCCGATTTGATCGGGATCGCCTACATCTCGGCGCAGAGGATCTTATCGGGTGAGAGGATTGATGAATGGTTCCAAATCGTTGGCTCAAGCTGCAAGCCGCCCAAACCAGACTCAGCCATTCGATTGGAGATGCGTTTCACAAAATGCGAGGACAATCCTCTGTACCGGTGTGGTATTGCTGCTGATCCGGACCATTTTGGTGTGAGAAATTGTTATTTTCCAGTTCGGCACGGAGGGTCTGTGAAGCTTTATCAAGACGCCCACGTGGCGGAGTCGACCTTACCAGAGATAGAGTTGGAGGGCGGGAAGAAGTACGTGCACGGGCAGTGTTGGGAGGAAATCTGCCATTCGATTTTGGAGGCTCATCACTTGGTTTACATTGTGGGATGGTCGGTGTTCCACAAGGTGAAGCTGGTTAGAGAGCCAACCAGACCATTGCCCGCTGGTGGGAATTTAAATCTTGGAGAGCTGCTCAAGTACAAATCACAAGAAGGGGTTAG 869 0.4914 MAGEESNETVYLHGDLDLRIIEARCLPNMDLVSERIRRFVSLLNPCRFQFPLKQKHHHHQQHSLKNMITSDPYVTVCLAGATVARTRVISNCQNPIWEEHFKIPLAHPVSQVEFHVKDNDVFGADLIGIAYISAQRILSGERIDEWFQIVGSSCKPPKPDSAIRLEMRFTKCEDNPLYRCGIAADPDHFGVRNCYFPVRHGGSVKLYQDAHVAESTLPEIELEGGKKYVHGQCWEEICHSILEAHHLVYIVGWSVFHKVKLVREPTRPLPAGGNLNLGELLKYKSQEGV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01438 289 ProSiteProfiles C2 domain profile. 1 147 IPR000008 -
Pte3g01438 289 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 172 IPR035892 -
Pte3g01438 289 PANTHER PHOSPHOLIPASE D 6 289 IPR015679 -
Pte3g01438 289 Pfam C2 domain 14 149 IPR000008 -
Pte3g01438 289 CDD C2_plant_PLD 9 170 - -
Pte3g01438 289 Gene3D C2 domain 13 177 IPR035892 -
Pte3g01438 289 SMART C2_3c 15 146 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01438 Pte-Chr3 12584281 12585530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01438 1 289 Phospholipase D Gene Family (Wang group) AT4G35790 53.378 9.69e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01438 K01115 - jre:108981014 454.136