Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01436 ATGAATGGTAAAGTTTACAGAGACTTCGTTGGAAGTGCCTATTATGTGGCTCCAGAAGTGTTACGCCGAAGCTACGGGAAGGAGTTAGATGTCTGGAGTGCTGGAGTCATTCTATACATACTCTTAAGTGGTGTGCCACCCTTTTGGGGCGACACCGAGGAAGCCATTTTCGATGCAATATCAGAGGGAAAACTTGACTTGCAGAGCTCACCATGGCCTTCTATATCGGCTCCTGCGAAGGATCTTCTCAGGAAAATGTTAGAGATGAATCCAGACAAAAGAATTACAGCAGCTGATGCTCTCGAGCATCCATGGATGAAAGAAGGCGGTGAAGCATCAGACAGACCTTTGGACAGTGCTGTTTTTATTAGGATGAAACAATTCCGAGCAATGAATAAGTTGAAGAAGCTTGCTTTAAAGGTAATAGCAGAGAACCTCACAGAGGAAGAGATCATAGGGTTGAAACAAATGTTCAACAACATGGACACGGATGGGAGTGGAACAATCACCGTCGAAGAACTCAAGACTGGATTGACCAGACTTGGATCTAAACTTACTGAATACGAAATAAAGCAGCTAATGGATGCTGCCGATGTTGATAAGAATGGAACTATCGATTACATTGAATTCATTACCGCTACCATGCATCGGCATAGGCTTGACAAGGAAGACCACCTTTACAAAGCTTTTCAATACTTTGACAAAGATGGTAGTGGGTTTATCACCAGAGATGAGCTTAGGCATGCTATGACTGAATATGGGATGGGGGATGAAGCTACAATAGATGAAGTCATCAACGATGTGGACACTGATAAAGACGGTAGAATCAACTATGGCGAATTTGTGGCCATGATGAAGAAAGGGACGCTTGACGACGTTGAGAAGCACAGATGA 894 0.4362 MNGKVYRDFVGSAYYVAPEVLRRSYGKELDVWSAGVILYILLSGVPPFWGDTEEAIFDAISEGKLDLQSSPWPSISAPAKDLLRKMLEMNPDKRITAADALEHPWMKEGGEASDRPLDSAVFIRMKQFRAMNKLKKLALKVIAENLTEEEIIGLKQMFNNMDTDGSGTITVEELKTGLTRLGSKLTEYEIKQLMDAADVDKNGTIDYIEFITATMHRHRLDKEDHLYKAFQYFDKDGSGFITRDELRHAMTEYGMGDEATIDEVINDVDTDKDGRINYGEFVAMMKKGTLDDVEKHR* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01436 297 SUPERFAMILY Protein kinase-like (PK-like) 4 128 IPR011009 -
Pte3g01436 297 SMART efh_1 225 253 IPR002048 GO:0005509
Pte3g01436 297 SMART efh_1 189 217 IPR002048 GO:0005509
Pte3g01436 297 SMART efh_1 260 288 IPR002048 GO:0005509
Pte3g01436 297 SMART efh_1 153 181 IPR002048 GO:0005509
Pte3g01436 297 Pfam Protein kinase domain 5 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01436 297 ProSitePatterns EF-hand calcium-binding domain. 162 174 IPR018247 -
Pte3g01436 297 Pfam EF-hand domain pair 154 214 IPR002048 GO:0005509
Pte3g01436 297 Pfam EF-hand domain pair 224 286 IPR002048 GO:0005509
Pte3g01436 297 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
Pte3g01436 297 SMART serkin_6 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01436 297 Gene3D - 113 290 - -
Pte3g01436 297 ProSitePatterns EF-hand calcium-binding domain. 198 210 IPR018247 -
Pte3g01436 297 ProSiteProfiles EF-hand calcium-binding domain profile. 185 220 IPR002048 GO:0005509
Pte3g01436 297 Gene3D Transferase(Phosphotransferase) domain 1 2 110 - -
Pte3g01436 297 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01436 297 ProSitePatterns EF-hand calcium-binding domain. 234 246 IPR018247 -
Pte3g01436 297 SUPERFAMILY EF-hand 145 286 IPR011992 -
Pte3g01436 297 ProSiteProfiles EF-hand calcium-binding domain profile. 257 291 IPR002048 GO:0005509
Pte3g01436 297 ProSiteProfiles EF-hand calcium-binding domain profile. 221 256 IPR002048 GO:0005509
Pte3g01436 297 FunFam Calcium-dependent protein kinase 1 114 289 - -
Pte3g01436 297 ProSitePatterns EF-hand calcium-binding domain. 269 281 IPR018247 -
Pte3g01436 297 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01436 Pte-Chr3 12572643 12574817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01436 3 291 EF-hand Containing Proteins AT1G76040 79.239 2.86e-171 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte3g01436 Pkinase 3.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01436 K13412 - qsa:O6P43_018724 498.819