Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01435 ATGTTTGATTCAGTTTTATTGGCACTGTTTCTGCCGTGCGCTGGGATGAGCGGAATTTTGATTGTATACATGTGCCTGTTGTGGTATGTCTCGAATCATAGGAGGCAAAGAGGTTCACCGCCCGTGAAAATAGCTTCCATCAAAGGACTTTCGCCTTTGGAGCTGGACATGTTACCCAAAGTGACAGGGAAAGAGCTGGTCATGGGGACCGAGTGTGCTGTTTGCCTTGACGAAATCGAAAGCGACCATCCTGCTCGAATTGTTCCTGGTTGCAACCATGGCTTCCATCTTGAATGCGCTGACACTTGGCTTTCCAACAATCGTTTGTGCCCGGTCTGCAGAGCCAAACTCGACCCTCAGTTTTTCAGTTCCTCCTCTCATAGTCCATGCTGA 393 0.4885 MFDSVLLALFLPCAGMSGILIVYMCLLWYVSNHRRQRGSPPVKIASIKGLSPLELDMLPKVTGKELVMGTECAVCLDEIESDHPARIVPGCNHGFHLECADTWLSNNRLCPVCRAKLDPQFFSSSSHSPC* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01435 130 SUPERFAMILY RING/U-box 71 120 - -
Pte3g01435 130 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 120 IPR013083 -
Pte3g01435 130 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 6 119 - -
Pte3g01435 130 ProSiteProfiles Zinc finger RING-type profile. 72 114 IPR001841 -
Pte3g01435 130 Pfam Ring finger domain 71 114 IPR001841 -
Pte3g01435 130 SMART ring_2 72 113 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01435 Pte-Chr3 12569232 12569901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01435 1 131 C3H Transcription Factor Family AT5G42200 52.555 9.25e-44 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01435 K19037 - gmx:100811160 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01435 3 12569232 12569901 Pte3g01435 3 12569232 12569901 RCT