Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01406 ATGGGAAAATCAACCTCCTGCTTGAAATTAATCGCCTGCGGCGGGGCTACGGCGGACAAAGATGATCATGACGTTTCTCAGGTCAAGGAATCAAATGATAAACGTGGGTGGAGTTTCCACAAAAGATCTGCAAGGCACCGAGTCCTGAGCAATACTGTGATATCGGAGGTCCCTTCCGTAAATAGGGAAAATTCAGAATGGACATGTGAAAAGATAGAATCTCCATCTGATGCTTTAGTAGATAAAATAACCACAACGCAGAGCTCAGATGAGAAACTAAACCTGTCGTCTTTGTTGAATTCAAAGACACCTGAAACACTTGTTGTTACTGCAATTGCTGATAAAGTGGAACATGACCTAGAAGAGTCTGCTGCTGTCGTTCTTCAGGCTGCTATTAGACAGTCTCTGGCTCAGAACGAACTGCTCAAGCTAAAGAATGCTGTCAAATTGCAAGCTGCAGTTCGTGGTCACTTAGTCCGTAGGCATGCTGTCGGAACCCTTCGCTGTGTTCAAGCAATTTTTAAGATTCAAGCGCTTGTTCGTGCTCGCCAGGGAAAGAAGAATGAATTAACGAAAACAAATGTAACATACTGTTCCATTGAAAAGATCCTCAGCAACGGCTTTGCACGTCATTTGCTGGAGTGTACTCCAAAAAACAAACGCATCCTCATTAAGTGTGATCCTTCCAGAGATGATTCTGCTTGGAAGTGGTTAGAGAGATGGATGGCCATTGCATCTGCAGATTTTGCTGAAAATAAAAATGCAGAATCCTTAGCTGAGCAATATGATTTCAAAAAGGAAAATATTTGTAAGTCCCAGGTGGAAACTGAAGAGTCTGACGCCAATCGGTCATCAACAGAGTCACGTTCCACACATGAGGAGCCAATTTTACCTTCCGAGTTTGAAGAGAACATGATTACTTATGATGCAAAGCACTTCACTATTGAACATGAGTTCCAGTTCGAATCTTCCCCTGCAAAGGATAACTTGCATGTCAGTCTGCTCGAGAACATGAATATAGCAAATGATATGGTAGTGTCTACAGAGATTAAGTCTCACCAATATGAAAATGCTCCATCAGATACAAGTTCTCAAGAGGCGGACAATTCTTTTCTTGAGAAAACTGTAGTTGAAACTGCACCAAGTAGACACTGTGTTGAAAGATTTACTTCAGACCAACTGGAGACTGACGGAAAGATACCTGTCATTGGGTCAAGAAAGCCCAGCAATCCTTTCTTTATTGCCGCACAGTCAAAATTTGAAGAACTGAGTTCATCAGTAAATTCAGGCAAATCTAACTCTTCATCTCATCATGATACTGGCTTTGAAGTGCAAGCAGATGCGGTTTCATCTGAGGCTGATACTGCAATCAGAACAAAGGAGTTCCACTCAACTGAGAATTCAGTCCAGTTTGCTTCAAGAGTTGAAGTTGGTGGCTCTAAATGTGGGACTGAACTTTATGTTGCTTCCACCCTTGATTCACCTGAGGCTGAAAATGAAGTCAAAGGCAAATGCACAGCTGAAGATGCTCGAGATCGTGAGTATGTGAATAAACTTGATAATGATGCTAAGGATCCACCTAATATTGCAGTATCCTACTTGTCTAAAGCCATCTCAGAGCAACCAGAGATACTTGAGAATGCAAATTCAGAAGCCATTGAACCAGTGCCATCTTTGGCCCCCGAAGATTGTGAACTAAAGATGGAGAGGAAAGCATCTGATGTTGATGGAGAACTAAACTCTGAGACTGTCCCTCAAGACTTCAGGGAATCGCTTGAAGCAACTCCTCGGAGCCATGTAACCGTCCCTGAATCAGAAGGAACACCCTCCAGTCAGGTTTCGATCAATCCTAAAGGAAGCAAAACTGGTAAGACTGGTAAAAATAATAAGCGGATGTCATTGTCAGGAGGTAAAAAGTCACCTGCACGTGCTTATAACGATTCTGGTTCAAGACGTAGTGGTGATGAGACGCATAAAGATCAGAGAACAGGGAAGAGACGCAATTCATTTGGCTTGGTGAAGCCTGATCATATTGATGAAGAGCCAAGAGACAGCAGCAGCAGTAAAGATCACTCCATTCCCCACTTCATGCAAGCTACAGAATCTGCAAGAGCAAAGATGCACGCTAATAACTCTCCAAGATCAAGTCCAGATATGCAAGACCGAGAAATTTACATCAAGAAGAGGCATTCTCTACCTAGTGCTACTGGTAGGCATGGATCTCCACGTATCCAGCGGTCAATGTCTCAGCTTAACAGGAAGGTATAA 2268 0.429 MGKSTSCLKLIACGGATADKDDHDVSQVKESNDKRGWSFHKRSARHRVLSNTVISEVPSVNRENSEWTCEKIESPSDALVDKITTTQSSDEKLNLSSLLNSKTPETLVVTAIADKVEHDLEESAAVVLQAAIRQSLAQNELLKLKNAVKLQAAVRGHLVRRHAVGTLRCVQAIFKIQALVRARQGKKNELTKTNVTYCSIEKILSNGFARHLLECTPKNKRILIKCDPSRDDSAWKWLERWMAIASADFAENKNAESLAEQYDFKKENICKSQVETEESDANRSSTESRSTHEEPILPSEFEENMITYDAKHFTIEHEFQFESSPAKDNLHVSLLENMNIANDMVVSTEIKSHQYENAPSDTSSQEADNSFLEKTVVETAPSRHCVERFTSDQLETDGKIPVIGSRKPSNPFFIAAQSKFEELSSSVNSGKSNSSSHHDTGFEVQADAVSSEADTAIRTKEFHSTENSVQFASRVEVGGSKCGTELYVASTLDSPEAENEVKGKCTAEDARDREYVNKLDNDAKDPPNIAVSYLSKAISEQPEILENANSEAIEPVPSLAPEDCELKMERKASDVDGELNSETVPQDFRESLEATPRSHVTVPESEGTPSSQVSINPKGSKTGKTGKNNKRMSLSGGKKSPARAYNDSGSRRSGDETHKDQRTGKRRNSFGLVKPDHIDEEPRDSSSSKDHSIPHFMQATESARAKMHANNSPRSSPDMQDREIYIKKRHSLPSATGRHGSPRIQRSMSQLNRKV* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01406 755 MobiDBLite consensus disorder prediction 601 635 - -
Pte3g01406 755 MobiDBLite consensus disorder prediction 738 755 - -
Pte3g01406 755 MobiDBLite consensus disorder prediction 590 755 - -
Pte3g01406 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 188 IPR027417 -
Pte3g01406 755 MobiDBLite consensus disorder prediction 273 294 - -
Pte3g01406 755 PANTHER IQ-DOMAIN 5-RELATED 1 738 - -
Pte3g01406 755 SMART iq_5 143 164 IPR000048 GO:0005515
Pte3g01406 755 SMART iq_5 120 142 IPR000048 GO:0005515
Pte3g01406 755 Pfam IQ calmodulin-binding motif 145 162 IPR000048 GO:0005515
Pte3g01406 755 ProSiteProfiles IQ motif profile. 143 172 IPR000048 GO:0005515
Pte3g01406 755 MobiDBLite consensus disorder prediction 704 718 - -
Pte3g01406 755 MobiDBLite consensus disorder prediction 649 690 - -
Pte3g01406 755 Gene3D - 119 169 - -
Pte3g01406 755 Pfam Protein of unknown function (DUF4005) 682 738 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01406 Pte-Chr3 12274705 12279812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01406 114 750 IQD Protein Family AT1G19870 35.000 1.37e-90 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01406 - - qsa:O6P43_018661 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01406 3 12274705 12279812 Pte3g01406 3 12274705 12279812 RCT