Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01385 ATGGCTTCCCCTAGTGGGAACTCCTCAGGTTCCTCTAAGATTCAGAACTCTGGGTCTGAAGAAGATATACACCTCGTGATGGATCAGAGGAAAAGGAAAAGAATGCAGTCAAATCGCGAATCGGCGAGGCGATCTCGTATGAGGAAACAGAAACATCTGGATGATCTAATGGTCCAGGCGAATGAATTAAGGACCGAGAACAGTCAAATCCTCAACAACATAAACGTCACCACTCAGCACTATCACGAAGTTGAGACAGAGAATTCCATTTTGAGGGCTCGCATGGCCGAGCTGACTCAAAGGCTGCAGTCTCTCGACGAAATCTTGAGCTACATCAACAAAACTACTGCTACTGGATTGTACGAAACTGATCACGCCTTTCCAACTGGTGTTGACAGCTTCACCCACCCGATAAACATGCTCTACCTCAACCAGCCTATCATGGCTTCTGCGGACATGTTTCATTACTGA 471 0.4671 MASPSGNSSGSSKIQNSGSEEDIHLVMDQRKRKRMQSNRESARRSRMRKQKHLDDLMVQANELRTENSQILNNINVTTQHYHEVETENSILRARMAELTQRLQSLDEILSYINKTTATGLYETDHAFPTGVDSFTHPINMLYLNQPIMASADMFHY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01385 156 Coils Coil 53 73 - -
Pte3g01385 156 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Pte3g01385 156 MobiDBLite consensus disorder prediction 1 51 - -
Pte3g01385 156 MobiDBLite consensus disorder prediction 1 19 - -
Pte3g01385 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 152 - -
Pte3g01385 156 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Pte3g01385 156 Gene3D - 28 81 - -
Pte3g01385 156 Pfam bZIP transcription factor 30 88 IPR004827 GO:0003700|GO:0006355
Pte3g01385 156 FunFam BZIP transcription factor 28 79 - -
Pte3g01385 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pte3g01385 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pte3g01385 156 Coils Coil 81 108 - -
Pte3g01385 156 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pte3g01385 156 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01385 Pte-Chr3 12052001 12053875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01385 26 157 bZIP Transcription Factor Family AT4G34590 49.275 1.07e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte3g01385 bZIP_1 3.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01385 K25786 - rcu:8275772 207.223