Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01372 ATGGCTTCAAGCTCACTCCCTTCTAAAAATAGTTCCAACACATCTTGGACGCCAAAGCAAAATAAACAATTTGAGAAGGCTCTTGCGGTGTATGGCAAAGACACCCCAGACCGCTGGCAAGATGTGGCCAGGGCTTTGGGTGTAAAATCTGGAGAGGAAATAAAGAGGCATTATGAAATTCTTATAGAGGATCTCATGCATATTGAGAATGGTCAGGTCCCCATACTCAACTACATATCTCCTATTTCAATAATATCTAGCCATCTCATACATCGTCCCGATCATGTCGCACAGAAACTTCTGACTCGAGAATCTTAA 318 0.4245 MASSSLPSKNSSNTSWTPKQNKQFEKALAVYGKDTPDRWQDVARALGVKSGEEIKRHYEILIEDLMHIENGQVPILNYISPISIISSHLIHRPDHVAQKLLTRES* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01372 105 CDD SANT 15 58 IPR001005 -
Pte3g01372 105 Gene3D - 6 75 - -
Pte3g01372 105 FunFam Transcription factor SRM1 8 75 - -
Pte3g01372 105 MobiDBLite consensus disorder prediction 1 20 - -
Pte3g01372 105 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 80 IPR044636 GO:0003700
Pte3g01372 105 SMART sant 12 64 IPR001005 -
Pte3g01372 105 Pfam Myb-like DNA-binding domain 15 58 IPR001005 -
Pte3g01372 105 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Pte3g01372 105 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01372 Pte-Chr3 11931530 11931847 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte3g01372 Myb_DNA-binding 3.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01372 - - qsa:O6P43_016180 115.931