Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01365 ATGTTCCCTACAGCTTGCCCAGCCACTTCTAGCATCCCCTCACCCTTGTCACCCCCGGAACTCTCAGTCACTGCCAAGGCTCGCAGTAAACGTTCCCGTGCACCACCATGCAGTTGGGCCTCCCGCCTTCTCATCGTCTCTTCAACGGCGTCGTCAACTGAAGATGAACTTGTCGTTTTATCTCCTCAGAGTGTGAGCACTGTAAAGAAGCCTGCTGCAAAGACAGGCATGCACAGGAAGAAGGACAATGGAGATGGTAGTTCCGGCGATGGACGGAGATGTCAGCACTGCGCAACCAATAAGACTCCACAATGGCGAACTGGACCTACGGGACCGAAATGCTTTGCAACGCTTGTGGAGTCAGAGTATAGACCAGCTGCTAGCTCAACATTCATGCTCACAAAGCATTCGAACTCGAACAGGAAGGTGATGGAGCTCCGGAGACAGAAGGAGATGTTGGGAGTACAGCCATTACGGCATCCAACTCATCTGCAGCTCTTGCAACAGCAAGCGATGATGTTCGATGCATCCAATGGCGATGAATACCTTATCCGCCAACATGTTGGTCCCAATATCGGGCATCTAATTTAG 591 0.5178 MFPTACPATSSIPSPLSPPELSVTAKARSKRSRAPPCSWASRLLIVSSTASSTEDELVVLSPQSVSTVKKPAAKTGMHRKKDNGDGSSGDGRRCQHCATNKTPQWRTGPTGPKCFATLVESEYRPAASSTFMLTKHSNSNRKVMELRRQKEMLGVQPLRHPTHLQLLQQQAMMFDASNGDEYLIRQHVGPNIGHLI* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01365 196 MobiDBLite consensus disorder prediction 1 37 - -
Pte3g01365 196 Gene3D - 87 143 IPR013088 GO:0006355|GO:0008270
Pte3g01365 196 ProSiteProfiles GATA-type zinc finger domain profile. 88 111 IPR000679 GO:0006355|GO:0043565
Pte3g01365 196 MobiDBLite consensus disorder prediction 1 18 - -
Pte3g01365 196 PANTHER GATA TRANSCRIPTION FACTOR 9 153 - -
Pte3g01365 196 SMART GATA_3 88 129 IPR000679 GO:0006355|GO:0043565
Pte3g01365 196 MobiDBLite consensus disorder prediction 68 93 - -
Pte3g01365 196 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 89 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01365 Pte-Chr3 11893142 11893758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01365 4 197 C2C2-Gata Transcription Factor Family AT5G25830 47.248 3.83e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte3g01365 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01365 - - gmx:100784144 199.904