Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01338 ATGCGATACCTTCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAAAGATCTCAGACCAAACAACATTCTTCTCACCCATGATTTTGAACCTCTGGTTGCTGATTTTGGGCTCGCTAGGTGGAACAGTGACGCAAATACAAAAACTGACAATCGAATTATTGGGTCATCAGGATACCTTGCACCAGAATATGTAGCCTCGGGAGAAATTTCACACAAGTTGGATGTGTATGCATTTGGAATGATCTTATTAGAGCTTATAACTGGTCAGAAAATCAACGAATTACAAAAATTCAACAAAATGCCAGAACTTGCCCAATGGTTTGGTTCTCCATTCATATTTAATCCAAATCAGATGGCGGCAAACTTTCAGTTACTAGACCCTTTCCTGGAAACTGACTCATCACTTGACTTTACTCATCAATTGCAAGCTATGTGTGTCGCCGCTTCCCTTTGCCTAAGCTCAGACCCTGACAACAGACCATCAATGTCAAAGGTTCTGAGGGTGCTTGAAGGAGGAGATCCTATTCCACAACTTGACTTGGATCTTAACTCAGTTGGTAATAGGAGTGGACATTTGTGCGGTCTGGCCTCTCGCTCGCAATTTGAAGTGCGAAGGAGCCATTCTCGCAGGTTGTCGCATTGA 645 0.4279 MRYLHEDCRVGCIVHKDLRPNNILLTHDFEPLVADFGLARWNSDANTKTDNRIIGSSGYLAPEYVASGEISHKLDVYAFGMILLELITGQKINELQKFNKMPELAQWFGSPFIFNPNQMAANFQLLDPFLETDSSLDFTHQLQAMCVAASLCLSSDPDNRPSMSKVLRVLEGGDPIPQLDLDLNSVGNRSGHLCGLASRSQFEVRRSHSRRLSH* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01338 214 Pfam Protein kinase domain 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01338 214 SUPERFAMILY Protein kinase-like (PK-like) 1 170 IPR011009 -
Pte3g01338 214 Gene3D Transferase(Phosphotransferase) domain 1 1 176 - -
Pte3g01338 214 PANTHER OS01G0253100 PROTEIN 2 172 - -
Pte3g01338 214 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01338 214 ProSitePatterns Tyrosine protein kinases specific active-site signature. 13 25 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01338 Pte-Chr3 11497393 11498536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01338 3 171 Trihelix Transcription Factor Family AT5G38560 40.351 6.10e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pte3g01338 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01338 - - qsa:O6P43_016115 271.552