Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01335 ATGCACATCATAAGTTCATACTCTGCAATGGATAACCCATCGCCATATTTCCCAGATCTCTCCTTACAGATTAGCCCACCGTCTATTACCTACAGCGAATGTAGGGAAGCAGCTGATCATGGAGGATATGTAACAAGAAAAGTCCTTCACAGTGACAAGTGCTCTACCTCTGATTCTCTGAGTAGCGGAAGTGATTTGAGCCATGAAACTGGTTCCTTCCAGTCACGGAAAACTTATTATCATCACCTTCCACGCACTGAACCACAATTGAGCTTAGCGTTAGATATGGAAGACATGAATCCCCAAGCCGTACAAATGTTACCGAGGACTGTCCGCCGCCACAACTACCAACCTCAAATTTACGATCGTGAGTTCAAGAGGAATGCACCAAGAACGATTGGAGTGAGAAGAAGCGTAAGAGCTCCCAGAATGAGATGGACTACAACACTCCATGCTCATTTTGTTCATGCGGTCCAGCTTCTTGGTGGGCATGAAAGGGCAACACCAAAGTCTGTTTTAGAGTTGATGAATGTGAAGGATTTAACCCTAGCACACGTAAAGAGTCACTTGCAGATGTATAGAACCGTAAAGAGCACAGCTAAGGGACCATCAGGTAATGAGCATACGGATATGGGTTCCAGACAAAAGGAAGAAAACATCGTCAATAGAGATACAGTACTGTACTGTGACAACTTGAATCAACCAAAACCCCAAAACATGCCACAAACTGCAAGATCATGGCAGGGATCAATGGAAACGGATGCATATGGTCGATTATTGATGAACCCTGATCCAGCTATCACGTACTCTCATTCCAAGACAACCGAGGGCAAGGTGGACGGATTCAAAGCAAACATACACGTCTCCCATTGCGTGAATGATAATTTGGAGTCCAGTTCCTTGTCATGTTCTGATAAGCTGCTTAATCTAGAGTTTACACTTGGAATACCAAGTAGCTAG 960 0.4427 MHIISSYSAMDNPSPYFPDLSLQISPPSITYSECREAADHGGYVTRKVLHSDKCSTSDSLSSGSDLSHETGSFQSRKTYYHHLPRTEPQLSLALDMEDMNPQAVQMLPRTVRRHNYQPQIYDREFKRNAPRTIGVRRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTAKGPSGNEHTDMGSRQKEENIVNRDTVLYCDNLNQPKPQNMPQTARSWQGSMETDAYGRLLMNPDPAITYSHSKTTEGKVDGFKANIHVSHCVNDNLESSSLSCSDKLLNLEFTLGIPSS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01335 319 Gene3D - 141 198 - -
Pte3g01335 319 FunFam Myb family transcription factor 140 198 - -
Pte3g01335 319 Pfam Myb-like DNA-binding domain 143 194 IPR001005 -
Pte3g01335 319 SUPERFAMILY Homeodomain-like 139 196 IPR009057 -
Pte3g01335 319 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 318 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pte3g01335 319 NCBIfam myb-like DNA-binding domain, SHAQKYF class 142 195 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01335 Pte-Chr3 11486330 11489482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01335 112 245 G2-like Transcription Factor Family AT5G42630 61.481 2.37e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte3g01335 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01335 - - rcu:8260895 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01335 3 11486330 11489482 Pte3g01335 3 11486330 11489482 RCT