Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01333 ATGGGCTCTGCCGCCGCTTGTGTAACTCCTTTTGGAAAAATGCAGACCTCATACTCCAACATCACCTTATGTCTGATTCTTTGCTCATCCTTCCATTTCTGCTGTTACGCATTATCCAACTATGAAGCGTCTCTCGTTGCTCATCGTCATCTTTTAACTCTTTCTGAAGGAAGAGATTCACCAGAGAATTATGCAAGTACATATGCAACGAATCTAACGTTTGCCAATTCCAGACTCAAAAGTGCATACATTGCACTGCAAGCATGGAAAAAAGCAATACATTCAGACCCATTACACACCACCTCCAATTGGGAGAGTGCAGATGTTTGTTCTTATAAAGGAGTCTTTTGTGCACCAGCACCAGATGATCCAAAACTTCATGTTGTGGCTGGCATCGATCTGAACCATGCAGACATTGCAGGACATCTTCCTGCAGAGTTGGGTTTGTTATCTGATGTAGCCTTGATTCACCTAAACTCAAACAGGTTTTGTGGGGTTGTTCCAGAAAGCTTCTCCAAGCTAAAGCTTCTGCATGAACTTGATCTTAGCAACAATCGTTTCGTTGGTTCATTTCCCACTGTCATTTTGTCACTTCCACAGATATATTACCTTGATCTCAGGTTTAATGGTTTTGAGGGCAAGTTACCTCCTGAGATTTTTGAAAAAAAGATGGATGCTGTATTTTTAAACAATAACCGCTTCACATCCACCATTCCGGAGAACCTTGGTAACTCTCCTGCCTCGGTTATTGTTTTTGCCAATAACCATTTCAATGGGTGCATCCCAAGTAGCATTGGAAAAATGACTACATTAAATGAGATCATTTTCTCAAACAATAGCTTTAGTGGGTGTTTGCCGGTTGAACTTCAAGATCTTGGAAATCTGACAATCTTTGATATCACCTTAAATTCATTTACCGGAATATTACCAAAGACCTTGAGTGGGCTAAGAAATATGGAGGAGTTTGCCATTTCTCACAATATGCTCACAGGTTTTGTTCCAGATTATATATGTACTCTTCCAAAATTAAGGAACTTTACTTTCTCATACAACTATTTCAATGGCGAGGGAGACCAGTGCAATCCACATTCAAGAAAACACATTGCTTTGGAGGATATCAACAATTGCATTTCTGGTAGGCCGAGCCAAAAGACAGAGCAAGAATGCAAACCAATAGTAAGCAAACCAGTTGATTGCAGCAAAGCTAAGTGTGGCTGGCCATCTTCACCATCTCCTTCGAGTCCGCCACCTGTTAGGTCACCCCCACCACCTGTCCACTCTCCTCCCCCTCCCAGGTCCTCACCCCCACCACCTCCACATTCTCCTCCTCCATCAGGTAAATTCGCTCTTCCCCCTATAATCAGCTCTCAATACTCGTCACCACCTCCACCGATCTTCCAAGGCTACTAA 1410 0.427 MGSAAACVTPFGKMQTSYSNITLCLILCSSFHFCCYALSNYEASLVAHRHLLTLSEGRDSPENYASTYATNLTFANSRLKSAYIALQAWKKAIHSDPLHTTSNWESADVCSYKGVFCAPAPDDPKLHVVAGIDLNHADIAGHLPAELGLLSDVALIHLNSNRFCGVVPESFSKLKLLHELDLSNNRFVGSFPTVILSLPQIYYLDLRFNGFEGKLPPEIFEKKMDAVFLNNNRFTSTIPENLGNSPASVIVFANNHFNGCIPSSIGKMTTLNEIIFSNNSFSGCLPVELQDLGNLTIFDITLNSFTGILPKTLSGLRNMEEFAISHNMLTGFVPDYICTLPKLRNFTFSYNYFNGEGDQCNPHSRKHIALEDINNCISGRPSQKTEQECKPIVSKPVDCSKAKCGWPSSPSPSSPPPVRSPPPPVHSPPPPRSSPPPPPHSPPPSGKFALPPIISSQYSSPPPPIFQGY* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01333 469 Gene3D Ribonuclease Inhibitor 81 248 IPR032675 -
Pte3g01333 469 FunFam Leucine-rich repeat extensin-like protein 1 83 244 - -
Pte3g01333 469 FunFam Leucine-rich repeat receptor protein kinase EMS1 245 336 - -
Pte3g01333 469 Pfam Leucine rich repeat N-terminal domain 83 117 IPR013210 -
Pte3g01333 469 Gene3D Ribonuclease Inhibitor 249 391 IPR032675 -
Pte3g01333 469 MobiDBLite consensus disorder prediction 452 469 - -
Pte3g01333 469 MobiDBLite consensus disorder prediction 404 469 - -
Pte3g01333 469 MobiDBLite consensus disorder prediction 409 449 - -
Pte3g01333 469 SUPERFAMILY L domain-like 83 359 - -
Pte3g01333 469 Pfam Leucine rich repeat 156 210 IPR001611 GO:0005515
Pte3g01333 469 Pfam Leucine rich repeat 294 352 IPR001611 GO:0005515
Pte3g01333 469 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 33 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01333 Pte-Chr3 11439431 11440840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01333 414 470 Trihelix Transcription Factor Family AT2G15880 52.632 1.99e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01333 - - qsa:O6P43_018873 530.406