Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01328 ATGTCAAGAGATGGCTTATATCTGAAGATATTTGTTCATTATGGCAGGAAAGAAGCCAATTCTACGGCACTGATGTCAGCAAAATCTTCATCTACCTATCGTGGTATAAACTCTCAAGAATTAGCCTGTGCAAATCCTACCTATAGTCTCAAAGTGAGCATTCCACCTCCAAGTCTAACCGCGAGTGATTTCTCTACCGCGACAGCGCCTCCAAAATCACAATTTAGAGATCTTTCATCACCAAATGTGGCCGTCGAAGGTGTCAAGCATGGGAATAACAATCGTAGAAAACTTTCTCAAGATGTTGATAACGAATATGTCGGTAGGAATTTAAGTCTACATGTTTCTCCCAAGAGTGCCCCAACAAGTGTTTTCACCAGTCCTACCAGTAGCCCACGTAGATCAGGCAATTTTGATCTGTCTGCCCTTTCCTCTGGTGTTCTGCAACTGAGTAATACTGAGCATTCTCCAACAAACCACAATCGTCGTCTCAGTCTGAAAGGTCAAGAGGGAAGTGCAACTTCTCAAAGACAAAAATCACTTCCTGAGATAAGGTGGTCTGAGATGAATGATCATGTCGATGCATATCCATTGCCTCTTCCTCCCAAGGCTACATCACCAGTGCAATCATCGTTGCAACCCCTATCCGCAATAACATATCATCATCTTGAAAGCCCTTTTGATTCTCCGATGAAAGGTCAATGGCAGAAAGGAAAATTAATAGGGCGTGGCACGTTTGGAAATGTTTATCTAGCAACTAATAGGTATGCAAAAATGTTATCAACCAATTGCTGGTGTTTGCACAGTGTTCAACTTCTACAAAATTTGCTTTGCCTTTTATGCAAGCTAAACTCCTTTACATTGGACAGAAAGACTGGAGCCTCGTGTGCGATGAAGGAGGTGGATCTCATTCCTGATGATCCCAAATCTGCAGAATGTATAAAGCAACTGGAACAGGAAATCAAAGTTCTCCGTCGACTTAAGCATCAAAACATTGTGCAATATCTGGGCAGTGAGATAATAGATGATCGCTTCTACATAAATCTGGAGTACGTTCATCCGGGATCAATAAATAAATTTATCCGTGAACATTCTGGAGCTATAACAGAATCAATTGTTCGCAATTTTACACGCCATGTTCTCGCTGGATTAGCTTATTTGCATGCCAATAAGACCATCCACAGGGATATCAAAGGAGCAAATTTGCTAGTTGATGGAACTGGTACTGTCAAGCTTGCAGATTTTGGGATGGCAAAAATTCTAAATGGGCAATCTTATGATCTCTCTTTGAAAGGCAGTCCTTACTGGATGGCACCAGAGGTGATAGAAGCTGCAATATTGAAAGATGCGAGTCCTAATCTGGCTTTTGCTGTTGATATCTGGAGCTTAGGATGCACAATCATAGAAATGTTCACCGGAAAGCCTCCTTGGAGTGAATATGAAGGGCCTCAAGCCATGTTCAAAGTTTTGCACATGAGCCCACCCATCCCAGAAACACTATCGCCAAATGGACAAGATTTCCTCCAGCAATGCTTTCAAAGGGATCCTGCAAAGCGACCATCAGCTGTTGTTTTACTCGAGCATCCGTTTGTTTGTAATTTACAACAACAAAATGCAAATGTCATTCCTCACTCACGACCATCTCCCAAACAAAATGAAATGGCCAAATCACCCAGTCCGAGAGAGTCAGCCAAACAAATCAATGAACTTCTATCTGCCTTTCGCGGCACCCAAACTTTGAACAGGCATTTGGATTTTGGCGGAGATGATCTTCGACCATTTAAAGCTCAAGAATCTAATTGCATGGAACCGTGCTGCAAATCTCCTCAACTTGTGCCTGAAGTCCACCCCATGAAACATAGTTCGGAATATTTTGTAACGTCTCCAGATGATTCCAGTAATATGCTGTTCAATGCGATTGCAACTATTCCCTTACCTTTGAAGTATGTAGTTAGTTAA 1959 0.4201 MSRDGLYLKIFVHYGRKEANSTALMSAKSSSTYRGINSQELACANPTYSLKVSIPPPSLTASDFSTATAPPKSQFRDLSSPNVAVEGVKHGNNNRRKLSQDVDNEYVGRNLSLHVSPKSAPTSVFTSPTSSPRRSGNFDLSALSSGVLQLSNTEHSPTNHNRRLSLKGQEGSATSQRQKSLPEIRWSEMNDHVDAYPLPLPPKATSPVQSSLQPLSAITYHHLESPFDSPMKGQWQKGKLIGRGTFGNVYLATNRYAKMLSTNCWCLHSVQLLQNLLCLLCKLNSFTLDRKTGASCAMKEVDLIPDDPKSAECIKQLEQEIKVLRRLKHQNIVQYLGSEIIDDRFYINLEYVHPGSINKFIREHSGAITESIVRNFTRHVLAGLAYLHANKTIHRDIKGANLLVDGTGTVKLADFGMAKILNGQSYDLSLKGSPYWMAPEVIEAAILKDASPNLAFAVDIWSLGCTIIEMFTGKPPWSEYEGPQAMFKVLHMSPPIPETLSPNGQDFLQQCFQRDPAKRPSAVVLLEHPFVCNLQQQNANVIPHSRPSPKQNEMAKSPSPRESAKQINELLSAFRGTQTLNRHLDFGGDDLRPFKAQESNCMEPCCKSPQLVPEVHPMKHSSEYFVTSPDDSSNMLFNAIATIPLPLKYVVS* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01328 652 Coils Coil 314 334 - -
Pte3g01328 652 Gene3D Transferase(Phosphotransferase) domain 1 355 583 - -
Pte3g01328 652 MobiDBLite consensus disorder prediction 115 138 - -
Pte3g01328 652 PRINTS Tyrosine kinase catalytic domain signature 458 480 IPR001245 GO:0004672|GO:0006468
Pte3g01328 652 PRINTS Tyrosine kinase catalytic domain signature 500 522 IPR001245 GO:0004672|GO:0006468
Pte3g01328 652 PRINTS Tyrosine kinase catalytic domain signature 386 404 IPR001245 GO:0004672|GO:0006468
Pte3g01328 652 PRINTS Tyrosine kinase catalytic domain signature 349 362 IPR001245 GO:0004672|GO:0006468
Pte3g01328 652 MobiDBLite consensus disorder prediction 150 183 - -
Pte3g01328 652 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 78 541 - -
Pte3g01328 652 MobiDBLite consensus disorder prediction 541 564 - -
Pte3g01328 652 FunFam Predicted protein 284 554 - -
Pte3g01328 652 MobiDBLite consensus disorder prediction 112 138 - -
Pte3g01328 652 SMART serkin_6 235 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01328 652 MobiDBLite consensus disorder prediction 150 184 - -
Pte3g01328 652 Gene3D Phosphorylase Kinase; domain 1 219 351 - -
Pte3g01328 652 SUPERFAMILY Protein kinase-like (PK-like) 212 566 IPR011009 -
Pte3g01328 652 Pfam Protein kinase domain 289 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01328 652 ProSiteProfiles Protein kinase domain profile. 235 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01328 Pte-Chr3 11393000 11396885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01328 191 536 MAP Kinase Kinase Kinase AT5G66850 61.850 8.51e-146 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte3g01328 Pkinase 9.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01328 - - qsa:O6P43_018890 625.55