Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01320 ATGTCTAGTAAGGGTGAAAGCCAAACAGTTCCTCTTTCTGTTCTTCTCAAGCGTGAATTGGCCAGTGAGAAGATTGAGAGGCCAGAGATTATGTACGGGCAAGCGAGTCAGAGTAAGAAAGGCGAAGATTTTACTCTACTCAAGACTGAATGCCAAAGAGTTGTGGGAGATGGAGTTTCTACCTATTCTGTTTTTGCGCTTTTTGATGGACACAATGGATCTGCAGCGGCAATATATGCTAAGGAGAATCTCCTAAATAATGTTTTAAGTGCTATCCCTCTCGACCTAAACAGAGATGAATGGATAGCAGCATTACCTAGGGCTTTAGTTGCAGGCTTTGTGAAAACGGATAAGGATTTTCAACAGAAAGAACAAACATCTGGAACAACTGTCACGTTTGTGATTATTGAAGGATGGTTTATCACGGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAAGCTGAGGGTGAAATCTATTACCTATCTGCAGATCATCGACTTGAAAGTAATGAAGAGGAGAGATTGCGAATCACAACAAGTGGGGGTGAAGTTGGCAGATTAAATACCGGTGGTGGTGCAGAGATTGGTCCTCTAAGGTGCTGGCCTGGTGGTTTGTGTCTTTCAAGATCCATAGGGGATGTGGATGTTGGCGAATTCATTGTTCCTGTACCTCATGTCAAGCAAGTGAAGCTGTCTACAGCAGGTGGCAGGCTGATCGTCTCTAGTGATGGTGTTTGGGACGCTTTAACAGCTGAAATGACTCTTGATTGTTGTCGTAATATGTCCGCTGATGCTGCAGCAGCACAAATTGTTAAAGAATCTGTACAAGCAAAAGGGCTTAGAGATGATACAACTTGCATTGTCATTGACATTCTACCACAGGAAAAGCAAGCTGCACCTTTGCCTCCCCCGAAGAAACCTGGGAAGAAAGTCTTCAAGTCCATGTTTCGCAAAAAGCCTTCAGAATCATCATCCAGTATAGATAAAGAATACGTTGAACCAGATGTAGTAGAGGAACTCTACGAAGAAGGATCTGCTATGCTTTCTGAAAGGTTAGAGACAAAATACCCACTCTGTAACATGTTTAAGTTGTTCATGTGTGCGGTTTGTCAGTTAGAGATGAGACCTGGGGAGGGTATTTCCATTCACGCTGGAGAATCCAACACTGGAAAATCGCGGCCATGGGATGGGCCTTTCCTTTGCTTAACTTGTCAAGAGAAGAAAGAAGCAATGGAAGGGAAAAGAGCATCAGATAGACATAGCAGTGCAAGTGACGAATAA 1284 0.4346 MSSKGESQTVPLSVLLKRELASEKIERPEIMYGQASQSKKGEDFTLLKTECQRVVGDGVSTYSVFALFDGHNGSAAAIYAKENLLNNVLSAIPLDLNRDEWIAALPRALVAGFVKTDKDFQQKEQTSGTTVTFVIIEGWFITVASVGDSRCILEAEGEIYYLSADHRLESNEEERLRITTSGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDVDVGEFIVPVPHVKQVKLSTAGGRLIVSSDGVWDALTAEMTLDCCRNMSADAAAAQIVKESVQAKGLRDDTTCIVIDILPQEKQAAPLPPPKKPGKKVFKSMFRKKPSESSSSIDKEYVEPDVVEELYEEGSAMLSERLETKYPLCNMFKLFMCAVCQLEMRPGEGISIHAGESNTGKSRPWDGPFLCLTCQEKKEAMEGKRASDRHSSASDE* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01320 427 FunFam probable protein phosphatase 2C 12 32 298 - -
Pte3g01320 427 SMART PP2C_4 23 290 IPR001932 -
Pte3g01320 427 MobiDBLite consensus disorder prediction 299 330 - -
Pte3g01320 427 PANTHER PROTEIN PHOSPHATASE 27 291 IPR015655 GO:0004722|GO:0006470
Pte3g01320 427 SMART PP2C_SIG_2 46 292 IPR001932 -
Pte3g01320 427 CDD PP2Cc 39 292 IPR001932 -
Pte3g01320 427 ProSiteProfiles PPM-type phosphatase domain profile. 24 292 IPR001932 -
Pte3g01320 427 Pfam Protein phosphatase 2C 54 282 IPR001932 -
Pte3g01320 427 SUPERFAMILY PP2C-like 37 292 IPR036457 -
Pte3g01320 427 Gene3D - 31 300 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01320 Pte-Chr3 11317010 11322829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01320 1 426 PP2C-type Phosphatase Gene Family AT1G47380 78.271 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01320 - - cave:132183890 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01320 3 11317010 11322829 Pte3g01320 3 11317010 11322829 RCT