Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01312 ATGAACTTCAAGAACTTCGGAAATGATCCTTCACTGGATAATGGCAGCAGTGGACGGTCAGTAGGGAATTTTCCTTTGACGCGGCAGTCCTCGATCTACTCTCTCACATTCGATGAGCTTATGAGTACCGGTGGTATAAGCAAAGACCTTGGTTCGATGAACATGGATGAGTTGCTGAAGAATATCTGGACTGCCGAAGAGTTACAAACCGTAGCCGCCGGTGGTGATGGTCAGGGAGGAACTGCTGCTGTTGTTGGCGACACTAGTGGTTTTGTTCCTGGCGGGAATTTGCAAAGGCAGGGTTCGTTGTCATTACCGAGGACACTTAGCCAGAAGACCGTCGATGAGGTGTGGAGGGATATATATAAGGAGTACAATGAGGGTAAAGATGGGAGAGCAATGGGTGGAGGTTCAAATATCCCACAGAGGGAACAAACTTTGGGAGAGATGACATTGGAGGAGTTCCTAGCGAGAGCTGGTGTTGTGAGAGAAGACAACCAGTTGGCTGCAAAGCCAAATATTGGAGTTTTTAGTGATCTCTCTAGTCACGACCAAGTCAACAATAATGGTGGTTTGGATTTGGGATTTCAGCAATTAAGCAAGAACAGAGGATTGACGGGGCATCCGATTCAAGTTCTCGGAAGTAACAATCAGATGAGTATCCAATCATCAACTAATTTACCATTGAATGTTAATGGGATTAGAACGAGTCAGCAACACCAGCAGCTACCGCAGCAGTCACAACGCCAGCAGCGGCAGCAGCAGATCTTTCCTAAGCAGCCTGCAATGGCTTTTGCAACACAGATGGCTTCACCGAATAGGGTGCAGTTGAATAGTCCAGGAGCTAGAAATGGAATTTTAGGAATTGGTGATCAGGGTTTGATTCAGGGTTCTGCTACGCAGGGTGGAGGGATGGGCATAGTTGATATGGGACCGGCTTCCGTTACTGTTGCTACGTTGTCACCAACAAATCAACTGTCAAGTGATGGAAATGGAAAGAGCAATGGTGACACCTCGTCCGTGTCACCCGTTCCTTACATGTTTAATGGAGGTTTAAGAGGAAGGAGGAGCAACGCAGCAGTGGAAAAGGTTGTTGAAAGGAGGCAGAGAAGAATGATAAAGAACAGAGAGTCTGCTGCTAGGTCGCGGGCCCGTAAGCAGGCATACACTATGGAACTGGAAGCAGAAGTTGCTAAATTAAAAGAGGAGAACGAAGAATTACGGAAGAAACAGGTATACTTCTGTAGTTACTGCTCATTAATCAACGGAGTATTTTTTGGTTCTGAAATATTCTCTTTCACCTGCTCAGGAAGAAATTGTGGCATTGCAGAAGAATCAGGTCATGGAGATAATGAATATGCAACGTGGAGTGAAGAAAAGGTGCTTGAGACGAACGCAAACCGGCTCCTGGTTTCAGTCGAGCATTTCCAGTGCCATCGATCAAAGCCAATGGTTTACGGTATTGCTTCTCGTGAACATGGTCATTAG 1488 0.4624 MNFKNFGNDPSLDNGSSGRSVGNFPLTRQSSIYSLTFDELMSTGGISKDLGSMNMDELLKNIWTAEELQTVAAGGDGQGGTAAVVGDTSGFVPGGNLQRQGSLSLPRTLSQKTVDEVWRDIYKEYNEGKDGRAMGGGSNIPQREQTLGEMTLEEFLARAGVVREDNQLAAKPNIGVFSDLSSHDQVNNNGGLDLGFQQLSKNRGLTGHPIQVLGSNNQMSIQSSTNLPLNVNGIRTSQQHQQLPQQSQRQQRQQQIFPKQPAMAFATQMASPNRVQLNSPGARNGILGIGDQGLIQGSATQGGGMGIVDMGPASVTVATLSPTNQLSSDGNGKSNGDTSSVSPVPYMFNGGLRGRRSNAAVEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRKKQVYFCSYCSLINGVFFGSEIFSFTCSGRNCGIAEESGHGDNEYATWSEEKVLETNANRLLVSVEHFQCHRSKPMVYGIASREHGH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01312 495 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 365 410 IPR004827 GO:0003700|GO:0006355
Pte3g01312 495 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 412 IPR043452 GO:0003700|GO:0045893
Pte3g01312 495 SMART brlzneu 363 427 IPR004827 GO:0003700|GO:0006355
Pte3g01312 495 CDD bZIP_plant_BZIP46 367 418 - -
Pte3g01312 495 Pfam bZIP transcription factor 367 410 IPR004827 GO:0003700|GO:0006355
Pte3g01312 495 SUPERFAMILY Leucine zipper domain 367 416 IPR046347 GO:0003700|GO:0006355
Pte3g01312 495 Coils Coil 383 410 - -
Pte3g01312 495 MobiDBLite consensus disorder prediction 1 23 - -
Pte3g01312 495 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 365 417 - -
Pte3g01312 495 Gene3D - 365 415 - -
Pte3g01312 495 MobiDBLite consensus disorder prediction 236 258 - -
Pte3g01312 495 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 370 385 IPR004827 GO:0003700|GO:0006355
Pte3g01312 495 MobiDBLite consensus disorder prediction 322 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01312 Pte-Chr3 11230552 11233336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01312 26 388 bZIP Transcription Factor Family AT1G45249 50.914 4.90e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte3g01312 bZIP_1 9.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01312 K14432 - qsa:O6P43_018931 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01312 3 11230552 11233336 Pte3g01312 3 11230552 11233336 RCT