Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01305 ATGCTGAAGCATATTTGTCTTAACTTTGATGTGGATAATGGTTTTCAATTCCTAAATGAACATGGTATACTTAATCTGCAATTTACTGTTTTGTTTTGTTTAATTCAGCAGATCCACAATGTTTTAGGTTTTATGCGAAGGGGTGAGAGACTACGAATTGAGGATGTGATGATCCTTGATCAATCAGTCTTACTCTTCTCTGGGGTGGCTGATTTTCATGATCGGCATAAGGACATGCGCCTTGATGTTGATGACATGTCTTACGAGGAGCTATTGGCTTTGGAGGAGCGAATCGGAAATGTAAGCACTGGGTTGAGTGAGGAAACCATATCAAACCGTCTGAAACAGAAGAAATATGTTGTTGTAGGTGAATCTCATACCGACAAAACCTTGCTGTATTTGTCAGGTGTTGGGAGCTGA 420 0.4 MLKHICLNFDVDNGFQFLNEHGILNLQFTVLFCLIQQIHNVLGFMRRGERLRIEDVMILDQSVLLFSGVADFHDRHKDMRLDVDDMSYEELLALEERIGNVSTGLSEETISNRLKQKKYVVVGESHTDKTLLYLSGVGS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01305 139 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 45 123 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01305 Pte-Chr3 11191158 11192502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01305 34 119 C3H Transcription Factor Family AT2G15530 61.628 2.53e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01305 - - msyl:126633076 140.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01305 3 11191158 11192502 Pte3g01305 3 11191158 11192502 RCT