Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01279 ATGAAATGCAATTCCTGGTTGAACTTGAACAGTTTCATTGCCCTTCTTGCCATGGTTCTTCTGTCCCAGAACTACTTTCTGCAACTTGCAGTGGCTCAAACACGGGTCAAATTCCTTCCTGGGTTTGAAGGGCCTCTTCCTTTTGAATTGGAAACTGGGTACATAGGAGTGGGTGAATCCGAGGACGTGCAACTGTTTTACTACTTCATTAAGTCTGAGTCCAATCCAGAAGAGGATCCTCTTATACTTTGGCTAAATGGGGGTCCCGGTTGCACCGGATTGACTGGGTTAATGTTTGAAATTGGTCCAATTACCATAAAGGAGGAGGAGTACAATGGCGACGTGCCAAAACTGGTCTTGAATTTAGAGTCATGGACAAAGGTATGCAGCATAATATTTTTTGATTTGCCGGTTGGCTCAGGTTTCTCTTACGCCAAGACTAAGCCACTTTCTAGTCTGCTTAGCGACACAAAGCAAGCTGACCATGCCTACCAGTTTCTCAGAAAGTGGTTGACAGAAGTTCATCCAGAATTTCTTTCAAACCCAACGTACATGGGTGGCGACTCCTACGCCGGCCTTCCTCTTCCAGTCCTCACTCAAGAAATATCAAACGGAAATGAAAGAGGCATTTTGCCTAAAATAAATCTGCAGGGATACCTTCTAGGGAATCCGCTTACCGATCTCAAAGAAGATAACATTAAAATTGGATACGCCCATGGAATGGGACTTGTCTCCGATGAATTGTACGAGTCATGGAAGAAAAACTGTAATGGAGGGCATCGTCCCCAAAACATGACAAATCTATTGTGCCAGAGAGTTTTGGACACCTTTAGCGAGTTGACGTCAAATATTGAACCCGCCCAAATTTTATTACCCAAATGCGATCTCGTTTCTCCAAGACCAAGAATCCCAAGTGGAGTTTCTTCAAGATCCATGATGGAACATTATGGGCCGCAACGAACCGATCATCGCCTCTCACTTCCAACGTTGGGTTGTCCGACCTACAAGTACTTGCTGAGTCAATATTGGGCAAATCACGAGGATGTGCGGGAAGCACTTCACATTCGTAAGGGAACTTTAGCTATTGGCGAATGGAAACGTTGCAACCGGAACATCCCCTACGACTTTGACGTGGACAGCAGCTTCAAATATCATGTTAATCTCAGTAGGAAAGGCTATCGTTCTCTGATTTACAGTGGTGATCATGACATGATTGTCCCTTTCTTGAGGACACAGGTCTGGGTCAGAAATTTGAACTACCCCATAGTGGATGAATGGAGACCATGGACTGTAAATGGTCAAGTTGCAGGATACACAAAGACTTACTCCAATCGGATGACTTTTGCTACTGTGAAGGGTGCAGGCCACACAGCTCCTGAATACAAACCAATACAGTGTCTTGCCATGATCACAAGGATATCAATCTTGCCAATGGTACGCACCTAG 1446 0.4481 MKCNSWLNLNSFIALLAMVLLSQNYFLQLAVAQTRVKFLPGFEGPLPFELETGYIGVGESEDVQLFYYFIKSESNPEEDPLILWLNGGPGCTGLTGLMFEIGPITIKEEEYNGDVPKLVLNLESWTKVCSIIFFDLPVGSGFSYAKTKPLSSLLSDTKQADHAYQFLRKWLTEVHPEFLSNPTYMGGDSYAGLPLPVLTQEISNGNERGILPKINLQGYLLGNPLTDLKEDNIKIGYAHGMGLVSDELYESWKKNCNGGHRPQNMTNLLCQRVLDTFSELTSNIEPAQILLPKCDLVSPRPRIPSGVSSRSMMEHYGPQRTDHRLSLPTLGCPTYKYLLSQYWANHEDVREALHIRKGTLAIGEWKRCNRNIPYDFDVDSSFKYHVNLSRKGYRSLIYSGDHDMIVPFLRTQVWVRNLNYPIVDEWRPWTVNGQVAGYTKTYSNRMTFATVKGAGHTAPEYKPIQCLAMITRISILPMVRT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01279 481 Pfam Serine carboxypeptidase 40 472 IPR001563 GO:0004185|GO:0006508
Pte3g01279 481 Gene3D alpha/beta hydrolase 35 476 IPR029058 -
Pte3g01279 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Pte3g01279 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Pte3g01279 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Pte3g01279 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Pte3g01279 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 463 IPR001563 GO:0004185|GO:0006508
Pte3g01279 481 SUPERFAMILY alpha/beta-Hydrolases 36 473 IPR029058 -
Pte3g01279 481 FunFam Serine carboxypeptidase-like 11 30 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01279 Pte-Chr3 10932729 10937841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01279 30 59 Calmodulin-binding Proteins AT2G22960 73.333 7.22e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01279 K16296 - qsa:O6P43_015968 589.726