Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01265 ATGGATCGGGATGACGGTTTGAATATGCGTAACTGGGGTTACTATGAACCCACAACAGCCCTTAAGGAACATCTTTGCCTTCAGCTTATGTCCTCTGTACCTGAAAAACCTCTATTTGGAGGGCGCAATCCTGCTATGTTCACGGGTACAAATGCTGCATATCATTACAGGGATATTGGGGTTTCTCAAGCAACATTGCCTATGGACTACATGAGAAATGCTTGGTTTAATCAGAGGGAAAAATATTTCAATATGATTCCTGGAAATTCCAGCTGTCCTGTTATACCTGAGACTTCATCGGCTCATCAAATGCAAATGGTTCAACAACCTGATTTATCAAGGGAGGAAAGAGTAATGGAAGAGACAGCTGTAGAGAAGCCTGTTGTCTCTAACAAAAAGAGGCAGCGACCTAAGATTCCAAAATCTCCCAAATTGAAGAAGGCTAAGAGAGGGCCTAGGAAGGATGAGAACAGTCCAGCAGCTCCACGACCAAGGTCTACAAAGAAAACTGCTGAAGTCATGATAAATGGGATTGATTTGGACATTCGCAGCATCCCAGTTCCAGTTTGCTCATGCACTGGGACACCACAACAATGCTACCGATGGGGCTCTGGTGGGTGGCAATCTGCATGTTGTACAACAGGCATGTCTATGTATCCATTGCCCATGAGTACAAAAAGGCGTGGAGCCCGAATAGCTGGAAGGAAAATGAGTATAGGAGCATTCAAGAAAGTATTAGAGAAACTAGCGGCTGAAGAGTATAATTTCTCTAATCCCATTGACTTGAGAACTCACTGGGCAAAGCATGGCACCAACAAGTTTGTTACTATCAGAAGGATGCAAATTCATCTAATAATTCTGTTATTGAGAAATAGCTGTGATCTACTTTTGTATGCTGCCATCTACATCAGATCATCATTGGAGAAAACTGCCTACCAACATTGCCATAAAAAGCAAATATCACGAACAGTTAGTCGTGTTTAA 984 0.4258 MDRDDGLNMRNWGYYEPTTALKEHLCLQLMSSVPEKPLFGGRNPAMFTGTNAAYHYRDIGVSQATLPMDYMRNAWFNQREKYFNMIPGNSSCPVIPETSSAHQMQMVQQPDLSREERVMEETAVEKPVVSNKKRQRPKIPKSPKLKKAKRGPRKDENSPAAPRPRSTKKTAEVMINGIDLDIRSIPVPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEEYNFSNPIDLRTHWAKHGTNKFVTIRRMQIHLIILLLRNSCDLLLYAAIYIRSSLEKTAYQHCHKKQISRTVSRV* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01265 327 MobiDBLite consensus disorder prediction 113 132 - -
Pte3g01265 327 Pfam GAGA binding protein-like family 1 278 IPR010409 -
Pte3g01265 327 PANTHER - 1 278 IPR010409 -
Pte3g01265 327 SMART GAGA_bind_2 1 278 IPR010409 -
Pte3g01265 327 MobiDBLite consensus disorder prediction 99 170 - -
Pte3g01265 327 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01265 Pte-Chr3 10830060 10832869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01265 1 278 BBR or BPC Transcription factor family AT2G01930 49.664 8.85e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte3g01265 GAGA_bind 1.2e-103 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01265 - - qsa:O6P43_008440 445.277