Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01259 ATGGGTAGTGGTAGAGTCGAAGTGATAAGCAGCAAGGGATGTTCTAGGATGTTTGCTGGGTTTTCTCCTTCATTGTCTGCTTTCAGAGGGCTGGAACCTATGTTCCCTGCTTCATCCCCTGTCAAGTCTGAGACAACAACTGTTCATCCGGGCGCCCCCTTTACTGGTTTAGTCATTTGCGTTACTGGTCTATCCAAAGAAGCAAGGAAGCAAGTAATGGAAGCCACCGAGAGATTAGGTGGCCAATATAGCCCTGATTTACACCCTCAATGTACCCATTTGGTTGTTCAGATATCCTTCCTTATCATCAATAGCTTGCTAGGACTCGAGCATGGGTTGAAATATGGAGCTAGAAATGGTCTCTTTATTATCACCATCGGATGGTTTGTGGACAGTGTCAGGAAAAATGTGAGGTTGAGTGAATCCCTTTACAGTGCTAGGAATTCTGGAGATAATGAAAAGCACTTGGATGAGTTAAATCGCCTTGTTGGGCATACAGGAGCTGAAAACTCTTGTTTTCCTGTCAGCATTCATGCTGCAAAGCAATTTAATGTGTCAGATGAACGTCAGGGAATTTCTTCTAGCCAATCAAGGGACTCAACTTTTTCTGGTTGCTCAATCTATGTTGATTCAGATGTTTCGTCCGAGATGCAAGATAAGGTCGTTGAGACAACTGTTAGAGAAGGTGCAAGTCTTCTTAAAAAGTGGTTTGTTGGGTGCAGCGTTTCTCATGTGGTCTGTGAAGTCGCATCAGTTGGGAAGTATCTTGGCCATTCTATTAACCTTGTCACACCTCACTGGATTCTGAAAACAGCAAAGGAGAAGCATATGCAAAGGGTAGTTCATATGTCTGCCGACTTGGCCAGGCAGGTTGGGATGAGGCTTGAAGATATTCGAAATGGTGTTACGAGGAAGGAAACAACAGAACAAAATAACCTTGAAAATAGCCAGAAAGCCAGAAGTGCGACAAACCACGAGGAAAGGCTGCAAATTGTGAATTCTGCAAAAACTGGTGTCAGGAATCGCCGTGGTCGACGAATGCAGACTTGTCAGACTCCCATAAGGCCTATAACACCAAGTAACCTTCTGGCTAATATCTGCTGGACAGTGTCAGAATCACCTTCAACTGCTTCAATTTACACAGACTCTCTTTGTGCTGGTGATGCTAATGAACATCATTGTGAGCTTTTTTACGAAAGGGGGGATGGAAACATATCAGAAGCTTCATTTGCAAACTCCACTCGACCTCTTACCGAAAGTGAGAAGTCTGAGGTGGTATTTAAACACAATTTTCTTACCATACTCTTTCCCATCGATCGATTTTCGGAGATGGGGCCTTCTTCAAGAACTTTCTTTAGTGCCAATGGCTTTACATGTCTCCAAGTGTTGGGTCATATCTTTGCGTTTTATCAGGAGAATCTATCAGACCATGAAATAGAAGCTGCAATTCACTCAGATTCTAGACATGCTGACCGGCTCCGATCAGTATACGCCAGTAAGGAAGCAGCAGATTCTGGATGTGTGAAATTCAGAAGGATTGAATTCTTGGGTAGCCGTAGATTTTTCGAAATGTTAAAGCGTGTCAGTGGTGATAACAGCTGCAATGTATATGAGCTGGTAGTTAGAGCTTGA 1632 0.435 MGSGRVEVISSKGCSRMFAGFSPSLSAFRGLEPMFPASSPVKSETTTVHPGAPFTGLVICVTGLSKEARKQVMEATERLGGQYSPDLHPQCTHLVVQISFLIINSLLGLEHGLKYGARNGLFIITIGWFVDSVRKNVRLSESLYSARNSGDNEKHLDELNRLVGHTGAENSCFPVSIHAAKQFNVSDERQGISSSQSRDSTFSGCSIYVDSDVSSEMQDKVVETTVREGASLLKKWFVGCSVSHVVCEVASVGKYLGHSINLVTPHWILKTAKEKHMQRVVHMSADLARQVGMRLEDIRNGVTRKETTEQNNLENSQKARSATNHEERLQIVNSAKTGVRNRRGRRMQTCQTPIRPITPSNLLANICWTVSESPSTASIYTDSLCAGDANEHHCELFYERGDGNISEASFANSTRPLTESEKSEVVFKHNFLTILFPIDRFSEMGPSSRTFFSANGFTCLQVLGHIFAFYQENLSDHEIEAAIHSDSRHADRLRSVYASKEAADSGCVKFRRIEFLGSRRFFEMLKRVSGDNSCNVYELVVRA* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01259 543 ProSiteProfiles BRCT domain profile. 49 146 IPR001357 -
Pte3g01259 543 SUPERFAMILY BRCT domain 200 278 IPR036420 -
Pte3g01259 543 SUPERFAMILY BRCT domain 51 146 IPR036420 -
Pte3g01259 543 Gene3D BRCT domain 181 281 IPR036420 -
Pte3g01259 543 Pfam twin BRCT domain 57 97 IPR001357 -
Pte3g01259 543 ProSiteProfiles BRCT domain profile. 197 275 IPR001357 -
Pte3g01259 543 Pfam Family of unknown function (DUF6699) 366 527 IPR046522 -
Pte3g01259 543 MobiDBLite consensus disorder prediction 301 325 - -
Pte3g01259 543 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 2 543 - -
Pte3g01259 543 MobiDBLite consensus disorder prediction 305 319 - -
Pte3g01259 543 Gene3D BRCT domain 52 148 IPR036420 -
Pte3g01259 543 SMART BRCT_7 199 275 IPR001357 -
Pte3g01259 543 SMART BRCT_7 51 136 IPR001357 -
Pte3g01259 543 CDD BRCT_TopBP1_rpt2_like 53 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01259 Pte-Chr3 10733501 10738494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01259 53 200 Core DNA Replication Machinery Family AT1G77320 31.788 6.40e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01259 - - qsa:O6P43_015824 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01259 3 10733501 10738494 Pte3g01259 3 10733501 10738494 RCT