Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01253 ATGGCGACTAATTCACTAAGGCTCTCTCTCTCTATGCAACCTAAGCCTCTCTTTGAATACTGCAGTTACAGAAGGAACGTTGGGGTTGACTCCCTCAGTCTTCTGTCAAGTGTACGCCGTAGTAGGTGGTGTCGTCGTGCTATTCTACGACCGGTCAGAGATCGTAATGTCGTCGTTTCGAATTCTCTTCAAACCAGGATTGATTCGCGGGACTTTAATCAACCTATCAAGGGTAAGGGTAAGGATAAGGGCAAGGACTCTCTGGTTCTGCTGGAGGTTTCAGGAATGATGTGCGGTGGTTGTGTTTCTCGTGTCAAATCTATATTGGCCGCCGAAGAAAGAGTAGAATCGGCGGTTGTCAACATGTTGACGGAGACAGCAGCCGTGAGATTGAGGAAGGTGGAGAGTTTGATGGGAAATGAGACTGTTGCCGATAGCTTGGCTGCGAGGCTGACGGAGTGTGGTTTTCCGTCCAAGAGGAGAGTGTCTGGATTGAGTGTGATGGAGAAGGCGAGGAAGTGGAAGGAGATTTCGAAGAAGAAGGAGGAGTTGCTTGTGAAGAGTCGGAATCGAGTGGCTGTTGCATGGACTCTGGTGGCCTTGTGTTGTGGATCGCACGCTTCGCATTTTTTGCATTCCTTGGGAATACATATTGCCCACGGTCCATTCTGGGATGTTCTTCATGATTCGTATCTGAAGGGTGGTGTGGCTTTGGCAGCTCTTCTAGGACCAGGTCGAGATTTGATATTTGATGGTTTAAAGGCTTTCAAGAAGGGATCCCCAAACATGAATTCTCTTGTGGGATTTGGTTCCCTGGCTGCTTTTGTTATCAGCGCGATTTCTCTGCTCAATCCTCGGCTGCAATGGGATGCATCATTTTTTGATGAACCGGTGACATGCCTTACTTTTGTTTTTTATTGCATTTCTTGCTGGTTTTCTTATCTTATGGTGAACTTGAGCAAGCAATTACTGATTTTGCATCGGTTATAA 990 0.4687 MATNSLRLSLSMQPKPLFEYCSYRRNVGVDSLSLLSSVRRSRWCRRAILRPVRDRNVVVSNSLQTRIDSRDFNQPIKGKGKDKGKDSLVLLEVSGMMCGGCVSRVKSILAAEERVESAVVNMLTETAAVRLRKVESLMGNETVADSLAARLTECGFPSKRRVSGLSVMEKARKWKEISKKKEELLVKSRNRVAVAWTLVALCCGSHASHFLHSLGIHIAHGPFWDVLHDSYLKGGVALAALLGPGRDLIFDGLKAFKKGSPNMNSLVGFGSLAAFVISAISLLNPRLQWDASFFDEPVTCLTFVFYCISCWFSYLMVNLSKQLLILHRL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01253 329 Gene3D - 82 162 - -
Pte3g01253 329 SUPERFAMILY HMA, heavy metal-associated domain 89 132 IPR036163 GO:0046872
Pte3g01253 329 Pfam Heavy-metal-associated domain 92 136 IPR006121 GO:0046872
Pte3g01253 329 ProSiteProfiles Heavy-metal-associated domain profile. 87 159 IPR006121 GO:0046872
Pte3g01253 329 PANTHER ATP7, ISOFORM B 55 306 - -
Pte3g01253 329 CDD HMA 91 157 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01253 Pte-Chr3 10683012 10684539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01253 88 163 Primary Pumps ATPases AT4G33520 43.590 7.00e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01253 K17686 - qsa:O6P43_019143 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01253 3 10683012 10684539 Pte3g01253 3 10683012 10684539 RCT