Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01247 ATGGACCAGGAGAAAGGCAAAAAAGAAAGAGCCTTCCCGCTACCTCCATTAGCAGAAAGAGTGAGGAAGGTGCTAGAGATCGCTCAAGCGATGCAATATCTTCACGAGCAAAAACCTAAAGTCATTCATCGGGGCTTAAAACCAAGCAACATCTTCTTGGATGATGCCGTGCATGTCAGAATAGCTTATTTTCGTCATGCGAGATTCTTGGCCGACGAAGAGATGGCACTCACTGGAGAAACTGGCATGCAATCATATAATCTACCATCTACTGATCTCCTATCATTACTGATTATTAATTAG 303 0.4323 MDQEKGKKERAFPLPPLAERVRKVLEIAQAMQYLHEQKPKVIHRGLKPSNIFLDDAVHVRIAYFRHARFLADEEMALTGETGMQSYNLPSTDLLSLLIIN* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01247 100 PANTHER OS01G0253100 PROTEIN 18 75 - -
Pte3g01247 100 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01247 100 SUPERFAMILY Protein kinase-like (PK-like) 14 79 IPR011009 -
Pte3g01247 100 Gene3D Transferase(Phosphotransferase) domain 1 4 90 - -
Pte3g01247 100 Pfam Protein kinase domain 24 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01247 Pte-Chr3 10643690 10643992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01247 25 89 Receptor kinase-like Gene Family AT3G02130 46.269 3.25e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Pte3g01247 Pkinase 1.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01247 - - fve:101312659 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01247 3 10643690 10643992 Pte3g01247 3 10643690 10643992 RCT