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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pte3g01244
ATGGACGGCGGTGCTCCGGGCTACCCACGTACGGTAGAAGAAGTTTTTAGAGATTTCAAGGGTCGGAGAGCCGGGTTGATGAAGGCTCTAACTGCTGATGTCGAAGACTTCTATCAACGGTGTGATCCAGAAAAGGAAAATCTCTGCCTGTATGGATTTCCTAGTGAGCATTGGGAAGTTAACCTGCCAGCTGAGGAGGTGCCTCCAGAGTTTCCAGAACCTGCCTTGGGCATTAATTTTGCCAGAGATGGGATGCAAGAGAAGGATTGGCTGACTTTGGTCGCAGTCCACAGTGATACATGGTTACTTGCAGTGGCCTTTTATTTTGGTGCTAAGTGTGGACTTGATAAGGCTGATAGGAAGAAACTTTTTAGTATGATAAATGATCTTCCAACAGTATTCGAAGTTGTGACAGGAGCCGCCAAGAAACAAGCAAAGGAAAAATCAAATCATAGTAGCGACAAATCAAACACAAAGCAAGCTTCTGAATCCCAAGGGAAGCATTCTAAGGCAATTCAACCTAAGGATGATGATGAGAACGATCTGAAAGATGATGATGAGCATGGGGAGACATTATGTGGGGCTTGTGGTGAGCACTATGCGGGTGGCGAATTCTGGATATGCTGTGACATTTGCGAGAAGTGGTTCCATGGGAAATGTGTGAAGATCACCGCTGCAAGGGCTGCGCATATCAAGCAATATATATGCCCATCGTGCAGCAACAGCAAGAAAGCTCGCCCTTGA
744
0.4637
MDGGAPGYPRTVEEVFRDFKGRRAGLMKALTADVEDFYQRCDPEKENLCLYGFPSEHWEVNLPAEEVPPEFPEPALGINFARDGMQEKDWLTLVAVHSDTWLLAVAFYFGAKCGLDKADRKKLFSMINDLPTVFEVVTGAAKKQAKEKSNHSSDKSNTKQASESQGKHSKAIQPKDDDENDLKDDDEHGETLCGACGEHYAGGEFWICCDICEKWFHGKCVKITAARAAHIKQYICPSCSNSKKARP*
248
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pte3g01244
247
ProSitePatterns
Zinc finger PHD-type signature.
193
239
IPR019786
-
Pte3g01244
247
FunFam
PHD finger alfin-like protein
185
241
-
-
Pte3g01244
247
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
183
241
IPR013083
-
Pte3g01244
247
Pfam
PHD-finger
193
241
IPR019787
-
Pte3g01244
247
CDD
PHD_AL_plant
192
241
IPR044104
-
Pte3g01244
247
SMART
PHD_3
192
240
IPR001965
-
Pte3g01244
247
Pfam
Alfin
11
139
IPR021998
GO:0006355|GO:0042393
Pte3g01244
247
SUPERFAMILY
FYVE/PHD zinc finger
184
244
IPR011011
-
Pte3g01244
247
ProSiteProfiles
Zinc finger PHD-type profile.
190
242
IPR019787
-
Pte3g01244
247
MobiDBLite
consensus disorder prediction
144
184
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pte3g01244
Pte-Chr3
10625952
10628047
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pte3g01244
1
248
Alfin-like Transcription Factor Family
AT3G42790
67.984
3.78e-108
310
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Alfin-like
Pte3g01244
Alfin
9.7e-67
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pte3g01244
K26274
-
rcu:8258558
410.223
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pte3g01244
3
10625952
10628047
Pte3g01244
3
10625952
10628047
RCT
Pte3g01244
3
10625952
10628047
Pte1g02445
1
45025455
45028455
RCT
Pte1g02445
1
45025455
45028455
Pte3g01244
3
10625952
10628047
RCT
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