Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01243 ATGAGTTTAGGAGCGGCCGAGAATGATTCGGCATCAGAAATTCATCTGCCAGCAGATATAGACTGGCACATGCTTGACAAATCTAGGTTTTTCTTTTTAGGTGCTGCTCTTTTTTCTGGTGTATCAGCTGCACTGTACCCCATAGTTGTGTTAAAAACTCGTCAACAAGTCTGTCGTACACAACTTTCTTGCTTGAAGATGTCTTTTTCCATTATGCGTTATGAAGGTTTCAGAGGATTTTACAGAGGTTTCGGTACTTCATTGATGGGAACCATCCCAGCTCGGGCGCTGTACATGACTGCACTCGAAGTTACCAAAAGTAATGTTGGTAATGCTACTCTTGCTTTAGGATTTTCGGATACAACTGTCACAGCAATCGCTAACGCTGCTGCCGGCCTTAGTTCTGCAATGGCTGCGCAGCTAGTTTGGACACCGATTGATGTTGTGAGCCAAAGACTCATGGTGCAGGGCTGTGACAAAAGCATGGGTGCCAATTCCTATTCTGGAAATTACAGTAACGGATTTGATGCGTTCAGGAAAATTGTGCGTTCAGATGGATTCAGAGGTCTGTACAGAGGTTTTGGGGTTTCGATTTTGACTTATGCGCCATCCAATGCAGTTTGGTGGGCTTCTTACTCTGTAGCAAACAGGTTCATCTTGGGGAGACTTGGATGCTATGGGGGGAAGAAAGACCAGAGTGGTTTAGGTTTAGCTAAGGGCTGCGCATATACGCCAGACTCCAAAGCTATGGTGGCTGTGCAGAGTTTGAGTGCAGTCATGGCCAGTGGGGTGTCAGCCATTATTACTATGCCGCTTGACACAATAAAAACCCGTTTGCAAGTGCTTGATGCAGAGGACAATGGCCGAAGGAGACCATTGACGGCTTTGCAGGTAGTAAGGAATCTGATGAGGGAAGGTGGTTTGGCTGCTTGCTACAGAGGGTTGGGTCCAAGCAACAAGCCTGAAGTTTCCTTATCACCCATGACGCGATGCCCTTCTTGTAAATTCAATATGTTTTAA 1020 0.4608 MSLGAAENDSASEIHLPADIDWHMLDKSRFFFLGAALFSGVSAALYPIVVLKTRQQVCRTQLSCLKMSFSIMRYEGFRGFYRGFGTSLMGTIPARALYMTALEVTKSNVGNATLALGFSDTTVTAIANAAAGLSSAMAAQLVWTPIDVVSQRLMVQGCDKSMGANSYSGNYSNGFDAFRKIVRSDGFRGLYRGFGVSILTYAPSNAVWWASYSVANRFILGRLGCYGGKKDQSGLGLAKGCAYTPDSKAMVAVQSLSAVMASGVSAIITMPLDTIKTRLQVLDAEDNGRRRPLTALQVVRNLMREGGLAACYRGLGPSNKPEVSLSPMTRCPSCKFNMF* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01243 339 Gene3D Mitochondrial carrier domain 29 319 IPR023395 -
Pte3g01243 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Pte3g01243 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Pte3g01243 339 SUPERFAMILY Mitochondrial carrier 24 318 IPR023395 -
Pte3g01243 339 Pfam Mitochondrial carrier protein 252 318 IPR018108 -
Pte3g01243 339 Pfam Mitochondrial carrier protein 123 220 IPR018108 -
Pte3g01243 339 Pfam Mitochondrial carrier protein 39 109 IPR018108 -
Pte3g01243 339 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 318 - -
Pte3g01243 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 218 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01243 Pte-Chr3 10620976 10622985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01243 1 317 Chloroplast and Mitochondria Gene Families AT1G72820 68.847 6.48e-153 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01243 K15121 - cave:132184272 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01243 3 10620976 10622985 Pte3g01243 3 10620976 10622985 RCT
Pte3g01243 3 10620976 10622985 Pte1g01354 1 35066419 35068429 RCT