Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01239 ATGACGGATTTAGCACCGGAGATGACTATGTTGGTGGCGGTGAGAAGCAAAGGTTTGCATTTAAAAACGAAGTCGGAGATTGAAATACTGGACGATGGATTCAAGTGGAGGAAGTATGGGAAGAAGATGGTCAAGAACAGCCCAAACCCGAGGAACTATTACAAGTGCTCAGTAGAAGGGTGTCCGGTTAAAAAAAGAGTTGAGAGAGATAGAGATGATCCAAGATATGTGTTAACGACTTACGAGGGTGTTCATACCCACCAAAGCTCGACCCCATTTATTTTTATTATATATTATTATATTTTATAA 309 0.4013 MTDLAPEMTMLVAVRSKGLHLKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPRYVLTTYEGVHTHQSSTPFIFIIYYYIL* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01239 102 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 90 IPR044810 GO:0003700
Pte3g01239 102 Pfam WRKY DNA -binding domain 31 88 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g01239 102 Gene3D WRKY domain 19 83 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g01239 102 FunFam WRKY transcription factor 57 16 90 - -
Pte3g01239 102 SMART WRKY_cls 30 89 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g01239 102 ProSiteProfiles WRKY domain profile. 25 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g01239 102 SUPERFAMILY WRKY DNA-binding domain 23 89 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01239 Pte-Chr3 10589349 10591095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01239 19 89 WRKY Transcription Factor Family AT5G26170 80.282 3.82e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte3g01239 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01239 - - csv:101203573 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01239 3 10589349 10591095 Pte3g01239 3 10589349 10591095 RCT