Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01237 ATGGAGATGTGTTCTACGGTAATGGTATCATTTAGAGTAGGCAATTCAGTTTGTAATAACCCAAGCACAGTTCCTGTTCCCCACATGGACATTACTGGACATAAGCTCATGACTGATGCCAGTTTGCTATCCGATTCTGTTGCTGAGACCTCTACTGAGACAGTTTCTGTTTCTATTGAGGATCTTAATGGCGGTTACCTAGAGGATGAAGCTGGTATTGCAGTTGCCATGCTACCAAAGGAGGAAGATAAAGGAGGAGTTTCTCCAGTGGTTGTAATATCTGAAAGTAAAGACACCTGGGTTAGTGGTGGGGATGATGAAGAAGCAGGAACGCAGGAAATCGAGGAGGAGGATTCCTTATCATTAGAGGGTGATCAGATTGTTGATAGTTCTTGTTCTATTTCAGTGGGTAGCGAGAATAGTAGTTTATATGGAGATGAGTTTTTGAGTTTTGAAACTATTTCTGAGGCAGGAACACCAAGTTCTGTGGAAAATGACAAGAATGTTTCTGGTGTCAATATTGCTACAAAGGCATTTGGGGCTCCCACTGTTGAGGCGGAAATCCTGAATGATCCTATTGCTGCTACCGTGAGCCTTGCAGAAGAGATAAGAGATAGGTCAGGCCCAGAGCCATCTTCAGTTGGCATGCAGTTGCCACTGGAAAAAGGGGTGACTGCAATTGCACCAGTTGGTCGCAGTGTTTTTGAGGTGGATTATGTTCCTCTTTGGGGATTTACATCTTTGTGTGGAAGGCGGCCTGAGATGGAAGATGCTGTAGCTACAGTACCACGATTTTTCAAAATTCCCATCCAGATGCTGATTGGCGATAAGGTACTTGATGGATTAACCAAGTGCATACCTCCGCAGACAGTACACTTCTTTGGTGTCTACGATGGCCATGGTGGTTCTCAGGTTGCTAACTACTGCCGCGAACGTATCCATCTGGCTTTGGCTGAAGAAGTGGAATCTGTTGCAGAGGGTGTAGTCAATGGAATTATCAAGGACAGTTTTCAAGATCAGTGGAAAAAGATATTCACCAATTGTTTTCTGAAAGTTGATGCAGAAGTTGGGGGAAAAGCTGGTCCCGAGCCCATTGCACCAGAAACAGTTGGTTCTACTGCCGTTGTTGCTATTATCTGTTCATCTCATATCATAGTAGCAAATTGTGGAGATTCACGAGCAGTTCTCTATCGTGGTAAAGAACCCATGGCACTATCAGTAGATCATAAACCTAATAGAGACGATGAATATGCTCGAATTGAGGCAGCTGGAGGAAAGGTCATACAGTGGAATGGCCATCGCGTATTTGGTGTTCTTGCCATGTCAAGGTCTATAGGAGACAGATATTTGAAACCTTGGATCATTCCCGAACCAGAAGTTGTGTTTCTTCCTCGGGCCAAAGAAGATGAATGCCTCATTCTCGCCAGTGATGGTCTTTGGGATGTTATGACGAATGATGAAGTCTGTGACCTTGCTCGAAAGCGGATACTTCTCTGGCACAAGAAGAATGGTGGCTCACCATCAGCGGAAAGGGGTGAAGGGATTGATCCTGCAGCTCAAGCAGCTGCAGAGTACCTTTCTAACCGTGCTCTTCAAAAAGGAAGCAAGGACAACATCACGGTTATTGTCGTGGATTTGAAAGCTCAAAGGAAATTCAAGAGTAAGACATAA 1671 0.4452 MEMCSTVMVSFRVGNSVCNNPSTVPVPHMDITGHKLMTDASLLSDSVAETSTETVSVSIEDLNGGYLEDEAGIAVAMLPKEEDKGGVSPVVVISESKDTWVSGGDDEEAGTQEIEEEDSLSLEGDQIVDSSCSISVGSENSSLYGDEFLSFETISEAGTPSSVENDKNVSGVNIATKAFGAPTVEAEILNDPIAATVSLAEEIRDRSGPEPSSVGMQLPLEKGVTAIAPVGRSVFEVDYVPLWGFTSLCGRRPEMEDAVATVPRFFKIPIQMLIGDKVLDGLTKCIPPQTVHFFGVYDGHGGSQVANYCRERIHLALAEEVESVAEGVVNGIIKDSFQDQWKKIFTNCFLKVDAEVGGKAGPEPIAPETVGSTAVVAIICSSHIIVANCGDSRAVLYRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVVFLPRAKEDECLILASDGLWDVMTNDEVCDLARKRILLWHKKNGGSPSAERGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01237 556 FunFam Protein phosphatase 2C 16 230 556 - -
Pte3g01237 556 ProSitePatterns PPM-type phosphatase domain signature. 293 301 IPR000222 GO:0043169
Pte3g01237 556 SUPERFAMILY PP2C-like 237 547 IPR036457 -
Pte3g01237 556 ProSiteProfiles PPM-type phosphatase domain profile. 242 546 IPR001932 -
Pte3g01237 556 Pfam Protein phosphatase 2C 272 539 IPR001932 -
Pte3g01237 556 CDD PP2Cc 244 546 IPR001932 -
Pte3g01237 556 PANTHER PROTEIN PHOSPHATASE 194 546 IPR015655 GO:0004722|GO:0006470
Pte3g01237 556 Gene3D - 229 556 IPR036457 -
Pte3g01237 556 SMART PP2C_4 232 544 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01237 Pte-Chr3 10555391 10559351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01237 114 557 PP2C-type Phosphatase Gene Family AT1G17550 53.404 5.02e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01237 K14497 - qsa:O6P43_019124 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01237 3 10555391 10559351 Pte3g01237 3 10555391 10559351 RCT