Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01236 ATGGAAGATCGTGGAGAAGAAGAAGAGATTTTGGGCTCCAGTTTGACGATGGAGAAAGTGGCGGCAGCAAAGCTGTACATAGAGAATCACTACAGAGCTCAGATGAAGAACATTCAAGAGCGTAAAGAAAGACGGTGGGTACTAGAAAGGAAGTTAGCTTCCTCTGATGTGCCAAATGAGGAGCGGATCAACCTCATTAAAGACTTAGAGAGAAAAGAGACTGAATTCATGCGATTGAAGAGGCACAAAATATGTGTTGATGATTTTGAACTTTTGACAATCATTGGAAGAGGGGCCTTTGGTGAGGTTCGATTGTGCCGTGAGAAGAAATCTGGCAATATTTATGCCATGAAGAAGTTGAAGAAATCTGAGATGCTTAAGAGAGGCCAGGTGGAACATGTTAAAGCCGAAAGGAATTTGTTGGCTGAAGTTGCAAGCCACTTCATAGTAAAGCTTTACTATTCCTTTCAGGACACTGAGTTCTTATATTTAGTAATGGAATATCTGCCTGGGGGTGACATAATGACTTTGTTGATGAGAGAAGATACTTTGACTGAGAATGTGGCCAGATTTTATATTGCACAGAGCATCCTGGCTATAGAGTCTATTCACAAGCACAATTACATTCACAGAGACATTAAACCTGACAACCTTCTTTTGGACATAAATGGTCACATGAAGCTCTCAGATTTTGGCCTTTGTAAGCCTCTTGACTGTAGAACTCTATCTACATTACATGAAAATAGAGCCATGGATGATGCAAGTTCGGCAGAGCCTATGGACATTGATGGTTGTTTCCCTGATGCGGACAACAGGAGTAGCTGGAGAAGTGCGCACGAACAGCTCCAGCATTGGCAGATGAACAGGCGAAAGTTGGCATTTTCAACTGTGGGGACACCAGACTATATTGCTCCTGAAGTATTGCTGAAGAAAGGATATGGGATGGAATGTGACTGGTGGTCATTGGGAGCAATAATGTATGAAATGCTTGTTGGTTATCCTCCATTTTATTCAGATGATCCAATAACAACGTGTAGAAAGATTGTTCATTGGAAAAATCATTTAAAGTTTCCAGAAGATGCAAGGTTGACAAACGAGGCCAAGGATCTTATTTGCAGGTTGCTATGTGACGTGGAGCACAGGCTAGGTACTGCAGGGGCCAACCAAATCAAAGCTCATCCTTGGTTCAAGGGTGTTGAGTGGGAAAAACTGTATGAATTGGAAGCAGCTTTTAAACCACAAGTGAACGGGGAGCTAGATACTCAAAACTTTATGAAATTTGATGAGGTGGATCCACCAACAGCAGCAAGAACTGGATCTGGACCGAGGAAGATGCTGACTCCAAAAGACATAAATTTTGTGGGTTACACTTACAAGAACTTCGATGCTGTAAAAGCACTTCTCCCATCTTTTGATATTAAATCAAGTGGATCACCAAGGGCGCCTTCTGTTCAAACTATATTTAGTGATGCTAGACCAGATTATCCTACTAATCCAGCAGCTGAAGAAACAGGATTACAAGTGTTTGCATCATCTGGGGATTCGATGCTACCGTGA 1557 0.42 MEDRGEEEEILGSSLTMEKVAAAKLYIENHYRAQMKNIQERKERRWVLERKLASSDVPNEERINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVEHVKAERNLLAEVASHFIVKLYYSFQDTEFLYLVMEYLPGGDIMTLLMREDTLTENVARFYIAQSILAIESIHKHNYIHRDIKPDNLLLDINGHMKLSDFGLCKPLDCRTLSTLHENRAMDDASSAEPMDIDGCFPDADNRSSWRSAHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWKNHLKFPEDARLTNEAKDLICRLLCDVEHRLGTAGANQIKAHPWFKGVEWEKLYELEAAFKPQVNGELDTQNFMKFDEVDPPTAARTGSGPRKMLTPKDINFVGYTYKNFDAVKALLPSFDIKSSGSPRAPSVQTIFSDARPDYPTNPAAEETGLQVFASSGDSMLP* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01236 518 FunFam Non-specific serine/threonine protein kinase 173 240 - -
Pte3g01236 518 SMART pkinase_C_6 397 460 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte3g01236 518 Gene3D Phosphorylase Kinase; domain 1 415 425 - -
Pte3g01236 518 Gene3D Phosphorylase Kinase; domain 1 87 172 - -
Pte3g01236 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 431 - -
Pte3g01236 518 Gene3D Transferase(Phosphotransferase) domain 1 291 414 - -
Pte3g01236 518 Gene3D Transferase(Phosphotransferase) domain 1 173 241 - -
Pte3g01236 518 FunFam Non-specific serine/threonine protein kinase 295 414 - -
Pte3g01236 518 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Pte3g01236 518 SUPERFAMILY Protein kinase-like (PK-like) 73 442 IPR011009 -
Pte3g01236 518 Pfam Protein kinase C terminal domain 415 458 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pte3g01236 518 CDD STKc_NDR_like 87 459 - -
Pte3g01236 518 ProSiteProfiles Protein kinase domain profile. 89 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01236 518 ProSiteProfiles AGC-kinase C-terminal domain profile. 397 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte3g01236 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pte3g01236 518 SMART serkin_6 89 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01236 518 FunFam Non-specific serine/threonine protein kinase 415 425 - -
Pte3g01236 518 CDD MobB_NDR_LATS-like 23 84 - -
Pte3g01236 518 Pfam Protein kinase domain 90 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01236 518 Pfam Protein kinase domain 288 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01236 518 FunFam Non-specific serine/threonine protein kinase 50 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01236 Pte-Chr3 10546213 10553477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01236 2 471 AGC Kinase Gene Family AT4G33080 82.241 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pte3g01236 Pkinase 3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01236 K08790 - qsa:O6P43_019123 905.975