Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01224 ATGTCATTCATGGAGGACCTCTGGCCACTTCTCCCCCTTCATGCTGTAAAGCGATCTTCCCATAATGATCCAAGAGAAAAAGAAATATTTGGGCACAACTGCTATGGCTCTCTTGTCCAGTCTTTCACATACTCCATGAACAATTCTGCTTCTGGAGGTTCCGAAGAAGAGCTATGTAGAGACGATTCCGCTGCATTCCTCCTTAAATTTGTGGCCATCGCATCGATATTTACCTCCGGTGTCGTTGGAATTGCCATCCCGCTCGTTGGTAAACACAGAAGGTTTCTTCGTACTGACGACAACCTCTTCGTCGCTACAAAAGCCTTTGCAGCAGGTGTAATTCTCGCTACCGGGTTTGTCCATATGCTCTCGGACGGGTCTGACGCACTCAGCGACCCAAACTTACCCGATTACCCATGGTCCAAATTCCCGTTTCCCGGCTTCTTTGCAATGTTGTCTGCGCTCCTAACTTTGCTCGTTGACTTTGTGGGAACCCAGTATTATATGTGGAATCAAGGAATAAACCATTCGACTAAGGAACAGGGTCCAGTAACGTCGTTAGAATCTGTAATAGTTCCTATTACAGAGCCTAATGACCGGAACGGTAATGTTATTGGGGAAGAGGAAGGTGGTGGAATACACATAGTTGAGATGCATGCGCATGCAGCCTACCATAGACACAGTCATCCTGGCGTTGAGGAAGCTTGTCATGGAAATGTAAAGCAAACTTCTCATGGTAATGGTTCCGGCCATTCACATGGGATCAGAGAGGAGTTTGGGGAAGGCGTGCGACATGTCATAGTTTCACAGATATTGGAACTTGGCATTGTATCACACTCCATCATTATTGGGCTATCACTAGGAGTTTCACAGAGTCCTTGTACAATAAGACCTTTAATTGCTGCACTATCCTTCCACCAATTCTTTGAAGGTTTTGCTCTTGGAGGGTGCATATCCCAAGCTCAATTCAAGACCTCATCCTCCATCACAATGGCAGGATTTTTTGCATTGACTACACCTATTGGAATTGGCTTGGGTGCTGGTGTTGCTTCAATCTACAACCCTTACAGCTCAGGGGCAATCATCACTGAAGGAATCCTGGATTGCTTGTCAGCTGGGGTTTTGGTATACATGGCTTTAGTAGACCTTATTGCTGTTGATTTTCTAAGCAAGAGGACGAGCTGCAATATTAGACTTCAGCTAGTGTCGTATGGCATGCTTTTCCTCGGGGCTGGATTGATGTCTTCACTCGCAATATGGGCCTGA 1266 0.4605 MSFMEDLWPLLPLHAVKRSSHNDPREKEIFGHNCYGSLVQSFTYSMNNSASGGSEEELCRDDSAAFLLKFVAIASIFTSGVVGIAIPLVGKHRRFLRTDDNLFVATKAFAAGVILATGFVHMLSDGSDALSDPNLPDYPWSKFPFPGFFAMLSALLTLLVDFVGTQYYMWNQGINHSTKEQGPVTSLESVIVPITEPNDRNGNVIGEEEGGGIHIVEMHAHAAYHRHSHPGVEEACHGNVKQTSHGNGSGHSHGIREEFGEGVRHVIVSQILELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKTSSSITMAGFFALTTPIGIGLGAGVASIYNPYSSGAIITEGILDCLSAGVLVYMALVDLIAVDFLSKRTSCNIRLQLVSYGMLFLGAGLMSSLAIWA* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01224 421 PANTHER ZINC/IRON TRANSPORTER 67 414 - -
Pte3g01224 421 NCBIfam ZIP zinc/iron transport family 55 421 IPR004698 GO:0005385|GO:0016020|GO:0071577
Pte3g01224 421 Pfam ZIP Zinc transporter 66 418 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01224 Pte-Chr3 10454411 10456737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01224 55 422 Inorganic Solute Cotransporters AT1G10970 69.293 1.52e-166 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01224 K14709 - qsa:O6P43_015904 560.066